RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 PPFIA2O75334 1257 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 STC2O76061 302 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 KLKB1P03952 638 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 DBHP09172 617 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 SFTPCP11686 197 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 ATP5C1P36542 298 aaKnown RBP6.86□□□□□ -1.31
SMC4-217ENST00000485867 GNL1P36915 607 aaPredicted RBP6.86□□□□□ -1.31
SMC4-217ENST00000485867 PRPHP41219 470 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 RIPPLY3P57055 190 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 POSTNQ15063 836 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 ME3Q16798 604 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 ISXQ2M1V0 245 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 FNDC3BQ53EP0 1204 aaKnown RBP6.86□□□□□ -1.31
SMC4-217ENST00000485867 ZNF776Q68DI1 518 aaPredicted RBP6.86□□□□□ -1.31
SMC4-217ENST00000485867 USP30Q70CQ3 517 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 USP53Q70EK8 1073 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 CLEC14AQ86T13 490 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 JAMLQ86YT9 394 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 CCDC83Q8IWF9 413 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 FAM26EQ8N5C1 309 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 B3GALNT2Q8NCR0 500 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 OR5B17Q8NGF7 314 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 EPN3Q9H201 632 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 PABPC3Q9H361 631 aaKnown RBP6.86□□□□□ -1.31
SMC4-217ENST00000485867 SNX25Q9H3E2 840 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 ST6GALNAC4Q9H4F1 302 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 PDE11AQ9HCR9 933 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 DMAP1Q9NPF5 467 aaPredicted RBP6.86□□□□□ -1.31
SMC4-217ENST00000485867 PRSS16Q9NQE7 514 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 INTS13Q9NVM9 706 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 COMMD8Q9NX08 183 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 OSER1Q9NX31 292 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 SERGEFQ9UGK8 458 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 NOL7Q9UMY1 257 aaKnown RBP6.86□□□□□ -1.31
SMC4-217ENST00000485867 ZNF451Q9Y4E5 1061 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 PCDHGA8Q9Y5G5 932 aa6.86□□□□□ -1.31
SMC4-217ENST00000485867 ATP8B3O60423 1300 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 PMS2P1A4D2B8 440 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 EPB41L2O43491 1005 aaKnown RBP6.85□□□□□ -1.31
SMC4-217ENST00000485867 TIMM44O43615 452 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 TACC1O75410 805 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 TP53P04637 393 aaPredicted RBP6.85□□□□□ -1.31
SMC4-217ENST00000485867 CYBBP04839 570 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 CKMT1AP12532 417 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 TOB1P50616 345 aaPredicted RBP6.85□□□□□ -1.31
SMC4-217ENST00000485867 DUSP3P51452 185 aaPredicted RBP6.85□□□□□ -1.31
SMC4-217ENST00000485867 CCR5P51681 352 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 INHBCP55103 352 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 ARID5AQ03989 594 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 IGFBP7Q16270 282 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 SLC45A4Q5BKX6 768 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 KLHDC10Q6PID8 442 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 PAQR3Q6TCH7 311 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 PAQR9Q6ZVX9 377 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 LSRQ86X29 649 aaPredicted RBP6.85□□□□□ -1.31
SMC4-217ENST00000485867 SLC25A45Q8N413 288 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 SYT8Q8NBV8 401 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 ZMIZ2Q8NF64 920 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 OR6B3Q8NGW1 331 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 OR2T34Q8NGX1 318 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 OR4C6Q8NH72 309 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 GOLGA1Q92805 767 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 HPS3Q969F9 1004 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 HVCN1Q96D96 273 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 SGF29Q96ES7 293 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 ATXN7L3BQ96GX2 97 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 ANKRD36BP1Q96IX9 119 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 CDK5RAP3Q96JB5 506 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 SERAC1Q96JX3 654 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 SLC2A11Q9BYW1 496 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 ZHX3Q9H4I2 956 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 TLR8Q9NR97 1041 aaKnown RBP6.85□□□□□ -1.31
SMC4-217ENST00000485867 FBXL12Q9NXK8 326 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 NCKAP1Q9Y2A7 1128 aa6.85□□□□□ -1.31
SMC4-217ENST00000485867 R3HCC1Q9Y3T6 440 aaKnown RBP6.85□□□□□ -1.31
SMC4-217ENST00000485867 HIVEP3Q5T1R4 2406 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 LY6G6EA0A0G2JKS1 128 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 A0A1W2PQ27 194 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 A0A1W2PQ64 194 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 A0A1W2PQC6 194 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 GOLGA8IPA6NC78 632 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 LRRC72A6NJI9 287 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 GOLGA8JA6NMD2 632 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 A8MXQ7 604 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 CBFA2T2O43439 604 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 TBCAO75347 108 aaKnown RBP6.84□□□□□ -1.31
SMC4-217ENST00000485867 LDHAP00338 332 aaKnown RBP6.84□□□□□ -1.31
SMC4-217ENST00000485867 GP1BAP07359 652 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 FAM163BP0C2L3 166 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 IFNGR1P15260 489 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 DDIT3P35638 169 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 CHKAP35790 457 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 NOP2P46087 812 aaKnown RBP6.84□□□□□ -1.31
SMC4-217ENST00000485867 CORO7P57737 925 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 SRSF6Q13247 344 aaKnown RBP6.84□□□□□ -1.31
SMC4-217ENST00000485867 DHX8Q14562 1220 aaKnown RBP6.84□□□□□ -1.31
SMC4-217ENST00000485867 SKIDA1Q1XH10 827 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 SKOR2Q2VWA4 1001 aaPredicted RBP6.84□□□□□ -1.31
SMC4-217ENST00000485867 NAPEPLDQ6IQ20 393 aa6.84□□□□□ -1.31
SMC4-217ENST00000485867 ZNF564Q8TBZ8 553 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms