RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 SRLQ86TD4 932 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 CPNE8Q86YQ8 564 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 TMTC1Q8IUR5 882 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 SPC24Q8NBT2 197 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 DEFB124Q8NES8 71 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.68□□□□□ -0.38
PTCD1-205ENST00000485746 SETD7Q8WTS6 366 aaKnown RBP12.68□□□□□ -0.38
PTCD1-205ENST00000485746 RAB7BQ96AH8 199 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 FAM131CQ96AQ9 280 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 PANX2Q96RD6 677 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 PDFQ9HBH1 243 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 GDF3Q9NR23 364 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 TM7SF3Q9NS93 570 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 DNAAF2Q9NVR5 837 aaKnown RBP12.68□□□□□ -0.38
PTCD1-205ENST00000485746 LHX3Q9UBR4 397 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 SEPT3Q9UH03 358 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 PCDHA13Q9Y5I0 950 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 FADS3Q9Y5Q0 445 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 DMDP11532 3685 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 SPAG17Q6Q759 2223 aa12.68□□□□□ -0.38
PTCD1-205ENST00000485746 LRRD1A4D1F6 860 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 TLR4O00206 839 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 VILLO15195 856 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 TSPAN6O43657 245 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 PIGNO95427 931 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 CD48P09326 243 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 CSRP1P21291 193 aaKnown RBP12.67□□□□□ -0.38
PTCD1-205ENST00000485746 SLC1A1P43005 524 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 SCNN1BP51168 640 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 BCL2L1Q07817 233 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 ITKQ08881 620 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 SLC14A1Q13336 389 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 DPYSL3Q14195 570 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 TMCO4Q5TGY1 634 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 SEL1L3Q68CR1 1132 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 KIAA1161Q6NSJ0 714 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 TP53INP2Q8IXH6 220 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 TSEN2Q8NCE0 465 aaKnown RBP12.67□□□□□ -0.38
PTCD1-205ENST00000485746 CXorf40AQ8TE69 158 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 ZNF830Q96NB3 372 aaPredicted RBP12.67□□□□□ -0.38
PTCD1-205ENST00000485746 ZNF599Q96NL3 588 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 ORAI3Q9BRQ5 295 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 CPEB1Q9BZB8 566 aaKnown RBP12.67□□□□□ -0.38
PTCD1-205ENST00000485746 SUV39H2Q9H5I1 410 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 ATP13A3Q9H7F0 1226 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 IL21RQ9HBE5 538 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 FRYLO94915 3013 aa12.67□□□□□ -0.38
PTCD1-205ENST00000485746 SOWAHDA6NJG2 315 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 LATO43561 262 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 AP1G1O43747 822 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 SH3BP5O60239 455 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 DFNA5O60443 496 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 MTA2O94776 668 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 KRT1P04264 644 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 CEACAM1P13688 526 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 HNRNPA2B1P22626 353 aaKnown RBP12.66□□□□□ -0.38
PTCD1-205ENST00000485746 KDELR1P24390 212 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 SERPINA4P29622 427 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 CCT8P50990 548 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 BNC1Q01954 994 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 ZNF284Q2VY69 593 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 LRRC73Q5JTD7 316 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 MARC1Q5VT66 337 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 ZSCAN30Q86W11 494 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 LRRC49Q8IUZ0 686 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 RHOT1Q8IXI2 618 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 MFSD2AQ8NA29 543 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 RAPGEF5Q92565 580 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 TSC1Q92574 1164 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 KLHDC7BQ96G42 594 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 ZNF641Q96N77 438 aaPredicted RBP12.66□□□□□ -0.38
PTCD1-205ENST00000485746 TUBGCP5Q96RT8 1024 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 ZNF670Q9BS34 389 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 SLC17A9Q9BYT1 436 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 FZD3Q9NPG1 666 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 SCUBE2Q9NQ36 999 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 HAUS2Q9NVX0 235 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 DDX56Q9NY93 547 aaKnown RBP12.66□□□□□ -0.38
PTCD1-205ENST00000485746 DKK3Q9UBP4 350 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 ZFR2Q9UPR6 939 aaKnown RBP12.66□□□□□ -0.38
PTCD1-205ENST00000485746 CA5BQ9Y2D0 317 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 HYOU1Q9Y4L1 999 aa12.66□□□□□ -0.38
PTCD1-205ENST00000485746 EPN1Q9Y6I3 576 aaPredicted RBP12.66□□□□□ -0.38
PTCD1-205ENST00000485746 CFAP54Q96N23 3096 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 MED19A0JLT2 244 aaPredicted RBP12.65□□□□□ -0.38
PTCD1-205ENST00000485746 IGLON5A6NGN9 336 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 UPK3BL1B0FP48 263 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 UPK3BL2E5RIL1 263 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 H0Y8X5 98 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 WNT9AO14904 365 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 GIPC1O14908 333 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 MFSD11O43934 449 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 NDUFA10O95299 355 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 PAK4O96013 591 aaPredicted RBP12.65□□□□□ -0.38
PTCD1-205ENST00000485746 WNT1P04628 370 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 CD59P13987 128 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 TIMP2P16035 220 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 COMTP21964 271 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 IL4RP24394 825 aa12.65□□□□□ -0.38
PTCD1-205ENST00000485746 HSPA9P38646 679 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms