RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 PPM1HQ9ULR3 514 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 SLC8A2Q9UPR5 921 aa16.03■□□□□ 0.16
APOE-205ENST00000485628 FARP1Q9Y4F1 1045 aaPredicted RBP16.03■□□□□ 0.16
APOE-205ENST00000485628 LOC285095A0A1B0GVY8 99 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 SUN1O94901 812 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 IGSF6O95976 241 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 MT-CYBP00156 380 aaPredicted RBP16.02■□□□□ 0.16
APOE-205ENST00000485628 EPOP01588 193 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 COL9A1P20849 921 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 MAPK8P45983 427 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 SCNN1BP51168 640 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 COPAP53621 1224 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 MRPS25P82663 173 aaKnown RBP16.02■□□□□ 0.16
APOE-205ENST00000485628 ELAVL3Q14576 367 aaKnown RBP16.02■□□□□ 0.16
APOE-205ENST00000485628 GRM3Q14832 879 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 UBXN2BQ14CS0 331 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 ACCSLQ4AC99 568 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 KIAA1211LQ6NV74 962 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 TMEM92Q6UXU6 159 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 ARHGEF18Q6ZSZ5 1173 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 SYT13Q7L8C5 426 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 TMIEQ8NEW7 156 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 SPATA22Q8NHS9 363 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 HCAR2Q8TDS4 363 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 CPT1BQ92523 772 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 FAM131CQ96AQ9 280 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 EXOC2Q96KP1 924 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 MRGPRX2Q96LB1 330 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 HEPHQ9BQS7 1158 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 TRIM51Q9BSJ1 452 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 RSPH9Q9H1X1 276 aaPredicted RBP16.02■□□□□ 0.16
APOE-205ENST00000485628 EIF2B3Q9NR50 452 aaKnown RBP16.02■□□□□ 0.16
APOE-205ENST00000485628 HAUS2Q9NVX0 235 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 RSPH14Q9UHP6 348 aa16.02■□□□□ 0.16
APOE-205ENST00000485628 EVLQ9UI08 416 aaPredicted RBP16.02■□□□□ 0.16
APOE-205ENST00000485628 TSPAN11A1L157 253 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 ERI2A8K979 691 aaKnown RBP16.01■□□□□ 0.15
APOE-205ENST00000485628 EFCAB8A8MWE9 144 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 ANXA9O76027 345 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 PDGFBP01127 241 aaPredicted RBP16.01■□□□□ 0.15
APOE-205ENST00000485628 EPHX1P07099 455 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 ALADP13716 330 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 TUBB4BP68371 445 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 GPS1Q13098 491 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 MPP3Q13368 585 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 MSLNQ13421 630 aaPredicted RBP16.01■□□□□ 0.15
APOE-205ENST00000485628 KCNJ11Q14654 390 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 PPP1R7Q15435 360 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 TRIP13Q15645 432 aaPredicted RBP16.01■□□□□ 0.15
APOE-205ENST00000485628 CRY1Q16526 586 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 EOGTQ5NDL2 527 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 RNASEH2BQ5TBB1 312 aaKnown RBP16.01■□□□□ 0.15
APOE-205ENST00000485628 RANBP10Q6VN20 620 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 STK40Q8N2I9 435 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 NAT8LQ8N9F0 302 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 ZNF641Q96N77 438 aaPredicted RBP16.01■□□□□ 0.15
APOE-205ENST00000485628 PPP1R2P1Q96PQ5 205 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 RBM15Q96T37 977 aaKnown RBP eCLIP16.01■□□□□ 0.15
APOE-205ENST00000485628 IER2Q9BTL4 223 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 FBRSQ9HAH7 460 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 ARNT2Q9HBZ2 717 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 C2orf42Q9NWW7 574 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 FAM153AQ9UHL3 310 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 SARDHQ9UL12 918 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 PPIL1Q9Y3C6 166 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 SIT1Q9Y3P8 196 aa16.01■□□□□ 0.15
APOE-205ENST00000485628 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16■□□□□ 0.15
APOE-205ENST00000485628 DNALI1O14645 258 aaPredicted RBP16■□□□□ 0.15
APOE-205ENST00000485628 SOCS5O75159 536 aa16■□□□□ 0.15
APOE-205ENST00000485628 AP2A1O95782 977 aa16■□□□□ 0.15
APOE-205ENST00000485628 SERPINF2P08697 491 aa16■□□□□ 0.15
APOE-205ENST00000485628 TPSB2P20231 275 aa16■□□□□ 0.15
APOE-205ENST00000485628 GKP32189 559 aa16■□□□□ 0.15
APOE-205ENST00000485628 ACTN2P35609 894 aa16■□□□□ 0.15
APOE-205ENST00000485628 CD86P42081 329 aa16■□□□□ 0.15
APOE-205ENST00000485628 WASP42768 502 aa16■□□□□ 0.15
APOE-205ENST00000485628 MAGEA9P43362 315 aa16■□□□□ 0.15
APOE-205ENST00000485628 RPL21P46778 160 aaKnown RBP16■□□□□ 0.15
APOE-205ENST00000485628 CDK16Q00536 496 aa16■□□□□ 0.15
APOE-205ENST00000485628 TRAF2Q12933 501 aa16■□□□□ 0.15
APOE-205ENST00000485628 TRADDQ15628 312 aa16■□□□□ 0.15
APOE-205ENST00000485628 TPSAB1Q15661 275 aa16■□□□□ 0.15
APOE-205ENST00000485628 DENND5AQ6IQ26 1287 aa16■□□□□ 0.15
APOE-205ENST00000485628 C8orf74Q6P047 294 aa16■□□□□ 0.15
APOE-205ENST00000485628 BMP8AQ7Z5Y6 402 aa16■□□□□ 0.15
APOE-205ENST00000485628 TDRD1Q9BXT4 1180 aaKnown RBP16■□□□□ 0.15
APOE-205ENST00000485628 SCUBE2Q9NQ36 999 aa16■□□□□ 0.15
APOE-205ENST00000485628 RAB6BQ9NRW1 208 aa16■□□□□ 0.15
APOE-205ENST00000485628 GRHL1Q9NZI5 618 aa16■□□□□ 0.15
APOE-205ENST00000485628 DKK3Q9UBP4 350 aa16■□□□□ 0.15
APOE-205ENST00000485628 IL36AQ9UHA7 158 aa16■□□□□ 0.15
APOE-205ENST00000485628 AAR2Q9Y312 384 aaKnown RBP16■□□□□ 0.15
APOE-205ENST00000485628 ARIH1Q9Y4X5 557 aaPredicted RBP16■□□□□ 0.15
APOE-205ENST00000485628 TCRBV7S3A2A0A539 114 aa15.99■□□□□ 0.15
APOE-205ENST00000485628 TMEM221A6NGB7 291 aa15.99■□□□□ 0.15
APOE-205ENST00000485628 C10orf142B7Z368 130 aa15.99■□□□□ 0.15
APOE-205ENST00000485628 M0R296 226 aa15.99■□□□□ 0.15
APOE-205ENST00000485628 PSMD3O43242 534 aa15.99■□□□□ 0.15
APOE-205ENST00000485628 PI15O43692 258 aa15.99■□□□□ 0.15
APOE-205ENST00000485628 ATG13O75143 517 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms