RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 KDELC2Q7Z4H8 507 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 PRUNE1Q86TP1 453 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 OR14C36Q8NHC7 312 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 NSMCE1Q8WV22 266 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 ISG20Q96AZ6 181 aaKnown RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 PSKH2Q96QS6 385 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 SEMA3CQ99985 751 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 C6orf106Q9H6K1 298 aaPredicted RBP12.03□□□□□ -0.48
APTX-227ENST00000485479 ITM2CQ9NQX7 267 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 JRKLQ9Y4A0 524 aa12.03□□□□□ -0.48
APTX-227ENST00000485479 BPTFQ12830 3046 aa12.02□□□□□ -0.48
APTX-227ENST00000485479 A8MX80 341 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 C1QTNF3-AMACRE9PGA6 284 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 LILRB5O75023 590 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 RBP3P10745 1247 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 PTPN3P26045 913 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 CD6P30203 668 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 MAT2AP31153 395 aaKnown RBP12.02□□□□□ -0.49
APTX-227ENST00000485479 NUBP1P53384 320 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 GDF10P55107 478 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 NIPAL4Q0D2K0 466 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 E2F5Q15329 346 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 AGBL4Q5VU57 503 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 TIGD7Q6NT04 549 aaPredicted RBP12.02□□□□□ -0.49
APTX-227ENST00000485479 DSG4Q86SJ6 1040 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 SRLQ86TD4 932 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 SLC13A5Q86YT5 568 aaPredicted RBP12.02□□□□□ -0.49
APTX-227ENST00000485479 PAF1Q8N7H5 531 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 SNX19Q92543 992 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 MAML1Q92585 1016 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 SPACA7Q96KW9 195 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 MGME1Q9BQP7 344 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 TMEM121Q9BTD3 319 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 SMOC1Q9H4F8 434 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 SCUBE2Q9NQ36 999 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 UBP1Q9NZI7 540 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 DNPEPQ9ULA0 475 aa12.02□□□□□ -0.49
APTX-227ENST00000485479 POP4O95707 220 aaKnown RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 ADH1BP00325 375 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 PRNPP04156 253 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 CR2P20023 1033 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 C5AR1P21730 350 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 CETN2P41208 172 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 NR2C2P49116 596 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 ADPRHP54922 357 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 TAS2R38P59533 333 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 PPP2CBP62714 309 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 PPP2CAP67775 309 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 WASHC5Q12768 1159 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 HNRNPDQ14103 355 aaKnown RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 RFTN1Q14699 578 aaPredicted RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 PLK5Q496M5 336 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 PIP5KL1Q5T9C9 394 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 DARS2Q6PI48 645 aaKnown RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 NCEH1Q6PIU2 408 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 SLC41A1Q8IVJ1 513 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 TEX26Q8N6G2 289 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 SPATA22Q8NHS9 363 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 CASKIN2Q8WXE0 1202 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 KLK6Q92876 244 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 C16orf45Q96MC5 204 aaPredicted RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 HSPA12BQ96MM6 686 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 ZNF599Q96NL3 588 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 TSGA13Q96PP4 275 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 QKIQ96PU8 341 aaKnown RBP eCLIP12.01□□□□□ -0.49
APTX-227ENST00000485479 RBM15Q96T37 977 aaKnown RBP eCLIP12.01□□□□□ -0.49
APTX-227ENST00000485479 PRRX2Q99811 253 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 FAM126AQ9BYI3 521 aaPredicted RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 BRD8Q9H0E9 1235 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 DUSP15Q9H1R2 295 aaPredicted RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 CARD9Q9H257 536 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 WSB2Q9NYS7 404 aaPredicted RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 PLXND1Q9Y4D7 1925 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 CCDC163A0A0D9SF12 145 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 C16orf96A6NNT2 1141 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 KCNN4O15554 427 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 NDUFS2O75306 463 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 ZNF217O75362 1048 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 MT-CYBP00156 380 aaPredicted RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 ABL2P42684 1182 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 DHPSP49366 369 aaPredicted RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 RENBPP51606 427 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 TRAF2Q12933 501 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 SIX1Q15475 284 aaPredicted RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 SLC45A4Q5BKX6 768 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 SYCP2LQ5T4T6 812 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 GDPD4Q6W3E5 623 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 KDM7AQ6ZMT4 941 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 HTR3CQ8WXA8 447 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 CAPZA3Q96KX2 299 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 OSBPL9Q96SU4 736 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 MYOCQ99972 504 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 AP1M1Q9BXS5 423 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 BTBD1Q9H0C5 482 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 DYRK4Q9NR20 520 aa12.01□□□□□ -0.49
APTX-227ENST00000485479 SMG5Q9UPR3 1016 aaKnown RBP12.01□□□□□ -0.49
APTX-227ENST00000485479 GOLGA6L9A6NEM1 432 aa12□□□□□ -0.49
APTX-227ENST00000485479 ALOX15BO15296 676 aa12□□□□□ -0.49
APTX-227ENST00000485479 FSBPO95073 299 aa12□□□□□ -0.49
APTX-227ENST00000485479 SEMA4FO95754 770 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms