RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 BUB1O43683 1085 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 AP1G1O43747 822 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 ZMPSTE24O75844 475 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 PIAS2O75928 621 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 LRIG2O94898 1065 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 GJB6O95452 261 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 POP4O95707 220 aaKnown RBP13.46□□□□□ -0.25
UBA3-210ENST00000485424 IGSF6O95976 241 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 GSRP00390 522 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 UNGP13051 313 aaPredicted RBP13.46□□□□□ -0.25
UBA3-210ENST00000485424 CHRNB2P17787 502 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 XPAP23025 273 aaPredicted RBP13.46□□□□□ -0.25
UBA3-210ENST00000485424 RABIFP47224 123 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 DUSP3P51452 185 aaPredicted RBP13.46□□□□□ -0.25
UBA3-210ENST00000485424 HNRNPKP61978 463 aaKnown RBP eCLIP13.46□□□□□ -0.25
UBA3-210ENST00000485424 TBC1D25Q3MII6 688 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 ZNF805Q5CZA5 627 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 DNAJC24Q6P3W2 148 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 DCUN1D2Q6PH85 259 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 KDM7AQ6ZMT4 941 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 GCNT7Q6ZNI0 430 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 PARS2Q7L3T8 475 aaKnown RBP13.46□□□□□ -0.25
UBA3-210ENST00000485424 CCDC185Q8N715 623 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 OR2AP1Q8NGE2 309 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 OR6K2Q8NGY2 324 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 FGF11Q92914 225 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 IFT43Q96FT9 208 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 GDAP1L1Q96MZ0 367 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 EPAS1Q99814 870 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 NCAPGQ9BPX3 1015 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 DUSP23Q9BVJ7 150 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 CATSPERBQ9H7T0 1116 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 ZNF212Q9UDV6 495 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 PCDHB1Q9Y5F3 818 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 FADS3Q9Y5Q0 445 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 ACTL7AQ9Y615 435 aa13.46□□□□□ -0.25
UBA3-210ENST00000485424 C16orf96A6NNT2 1141 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 LGALS16A8MUM7 142 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 TK2O00142 265 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 EPHB6O15197 1021 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 CREB3O43889 395 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 ZNF821O75541 412 aaPredicted RBP13.45□□□□□ -0.26
UBA3-210ENST00000485424 UGT2B4P06133 528 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 GIMD1P0DJR0 217 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 EPHB2P29323 1055 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 RFC1P35251 1148 aaPredicted RBP13.45□□□□□ -0.26
UBA3-210ENST00000485424 ACTN2P35609 894 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 GSCP56915 257 aaPredicted RBP13.45□□□□□ -0.26
UBA3-210ENST00000485424 TLE3Q04726 772 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 C19orf57Q0VDD7 668 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 CCDC173Q0VFZ6 552 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 PTK2BQ14289 1009 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 CLEC16AQ2KHT3 1053 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 TMEM259Q4ZIN3 620 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 RAB6CQ53S08 254 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 KYAT3Q6YP21 454 aaKnown RBP13.45□□□□□ -0.26
UBA3-210ENST00000485424 LEKR1Q6ZMV7 388 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 ABI3BPQ7Z7G0 1075 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 NLRP14Q86W24 1093 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 PHF13Q86YI8 300 aaPredicted RBP13.45□□□□□ -0.26
UBA3-210ENST00000485424 PLPP6Q8IY26 295 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 SLC22A18ASQ8N1D0 253 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 C3orf20Q8ND61 904 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 CXorf40AQ8TE69 158 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 NTAN1Q96AB6 310 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 KLHL32Q96NJ5 620 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 C1QTNF7Q9BXJ2 289 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 RAB6CQ9H0N0 254 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 ABCG4Q9H172 646 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 NDFIP2Q9NV92 336 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 DONSONQ9NYP3 566 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 NLGN3Q9NZ94 848 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 SIK3Q9Y2K2 1263 aa13.45□□□□□ -0.26
UBA3-210ENST00000485424 IGLON5A6NGN9 336 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 SIGLEC16A6NMB1 481 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 CCP110O43303 1012 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 KDELR3O43731 214 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 ZIC2O95409 532 aaPredicted RBP13.44□□□□□ -0.26
UBA3-210ENST00000485424 MT-CO3P00414 261 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 CKMT1AP12532 417 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 GKP32189 559 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 THOP1P52888 689 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 AIF1P55008 147 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 HDAC4P56524 1084 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 RHOAP61586 193 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 PDE1CQ14123 709 aaPredicted RBP13.44□□□□□ -0.26
UBA3-210ENST00000485424 ZNF542PQ5EBM4 170 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 CFAP58Q5T655 872 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 MANEALQ5VSG8 457 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 CDCP2Q5VXM1 449 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 PPP1R2P3Q6NXS1 205 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 WDR59Q6PJI9 974 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 GDPD4Q6W3E5 623 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 CLEC17AQ6ZS10 378 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 TTC7BQ86TV6 843 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 PARGQ86W56 976 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 SPACA3Q8IXA5 215 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 PAF1Q8N7H5 531 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 CASKIN2Q8WXE0 1202 aa13.44□□□□□ -0.26
UBA3-210ENST00000485424 CENPIQ92674 756 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms