RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ATXN7L3BQ96GX2 97 aa16.9■□□□□ 0.3
CTSA-207ENST00000484855 RANBP9Q96S59 729 aa16.9■□□□□ 0.3
CTSA-207ENST00000484855 SLC2A6Q9UGQ3 507 aa16.9■□□□□ 0.3
CTSA-207ENST00000484855 LOC285095A0A1B0GVY8 99 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 RFPL2O75678 378 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 ATXN1LP0C7T5 689 aaKnown RBP16.89■□□□□ 0.3
CTSA-207ENST00000484855 DHRS4L1P0CG22 281 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 MYOGP15173 224 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 SF3A3Q12874 501 aaKnown RBP eCLIP16.89■□□□□ 0.38e-7■■■□□ 14.8
CTSA-207ENST00000484855 CDH18Q13634 790 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 FSCBQ5H9T9 825 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 HTR3DQ70Z44 454 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 CCDC197Q8NCU1 140 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 SPOCK2Q92563 424 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 FEM1CQ96JP0 617 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 VPS11Q9H270 941 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 TREX1Q9NSU2 369 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 GGA2Q9UJY4 613 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 PLLPQ9Y342 182 aa16.89■□□□□ 0.3
CTSA-207ENST00000484855 ARHGEF15O94989 841 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 VAPBO95292 243 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 F7P08709 466 aaPredicted RBP16.89■□□□□ 0.29
CTSA-207ENST00000484855 CRHR1P34998 444 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 IRS1P35568 1242 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 CCR2P41597 374 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 CDK18Q07002 472 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 KIAA0930Q6ICG6 404 aaPredicted RBP16.89■□□□□ 0.29
CTSA-207ENST00000484855 FAM47EQ6ZV65 393 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 BBS7Q8IWZ6 715 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 BHMTQ93088 406 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 CABS1Q96KC9 395 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 SLC46A2Q9BY10 475 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 BPTFQ12830 3046 aa16.89■□□□□ 0.29
CTSA-207ENST00000484855 LEFTY2O00292 366 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 GRM6O15303 877 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 FGF19O95750 216 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 HLA-DPA1P20036 260 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 MZF1P28698 734 aaPredicted RBP16.88■□□□□ 0.29
CTSA-207ENST00000484855 SERPINB8P50452 374 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 ARF5P84085 180 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 CNGA3Q16281 694 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 RTL10Q7L3V2 364 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 CPXM2Q8N436 756 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 DCLK2Q8N568 766 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 ANKS4BQ8N8V4 417 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 TDRD5Q8NAT2 981 aaKnown RBP16.88■□□□□ 0.29
CTSA-207ENST00000484855 SHKBP1Q8TBC3 707 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 DDI1Q8WTU0 396 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 ZNF75CPQ92670 426 aaPredicted RBP16.88■□□□□ 0.29
CTSA-207ENST00000484855 EXOC2Q96KP1 924 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 PITPNM3Q9BZ71 974 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 VPS28Q9UK41 221 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 NOTCH4Q99466 2003 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 TIMM44O43615 452 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 SNX3O60493 162 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 SNAP91O60641 907 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 FGF1P05230 155 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 ARNTP27540 789 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 TYK2P29597 1187 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 RGRP47804 291 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 ARCN1P48444 511 aaKnown RBP16.88■□□□□ 0.29
CTSA-207ENST00000484855 PDE1CQ14123 709 aaPredicted RBP16.88■□□□□ 0.29
CTSA-207ENST00000484855 CYTH1Q15438 398 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 SLC14A2Q15849 920 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 TSTD2Q5T7W7 516 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 GPR158Q5T848 1215 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 FSTL4Q6MZW2 842 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 MFN1Q8IWA4 741 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 CNTN4Q8IWV2 1026 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 WFDC5Q8TCV5 224 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 ATP2A3Q93084 1043 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 SMG9Q9H0W8 520 aaKnown RBP16.88■□□□□ 0.29
CTSA-207ENST00000484855 NOD2Q9HC29 1040 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 SCUBE2Q9NQ36 999 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 MYO7AQ13402 2215 aa16.88■□□□□ 0.29
CTSA-207ENST00000484855 EPOP01588 193 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 RB1P06400 928 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 EPCAMP16422 314 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 PTPN2P17706 415 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 CSKP41240 450 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 ABCG1P45844 678 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 SERPINB4P48594 390 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 SCNN1BP51168 640 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 EPHA5P54756 1037 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 MSLNQ13421 630 aaPredicted RBP16.87■□□□□ 0.29
CTSA-207ENST00000484855 THOC5Q13769 683 aaKnown RBP16.87■□□□□ 0.29
CTSA-207ENST00000484855 CAMK1Q14012 370 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 GALNT3Q14435 633 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 LINGO4Q6UY18 593 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 ARMC2Q8NEN0 867 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 ISL2Q96A47 359 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 TCEAL4Q96EI5 215 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 VPS39Q96JC1 886 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 FEM1AQ9BSK4 669 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 HTATIP2Q9BUP3 242 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 SNX15Q9NRS6 342 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 ARHGAP26Q9UNA1 814 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 CHD7Q9P2D1 2997 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 INSIG1O15503 277 aa16.87■□□□□ 0.29
CTSA-207ENST00000484855 GLRA3O75311 464 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms