RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 RETSATQ6NUM9 610 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 NLRP14Q86W24 1093 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 TMTC1Q8IUR5 882 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 SPACA3Q8IXA5 215 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 RTL3Q8N8U3 475 aaKnown RBP10.19□□□□□ -0.78
CPSF4-213ENST00000484112 MFSD2AQ8NA29 543 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 LSM14AQ8ND56 463 aaKnown RBP10.19□□□□□ -0.78
CPSF4-213ENST00000484112 TEKT4Q8WW24 435 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 CCDC114Q96M63 670 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 MUC3BQ9H195 1237 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 ERVMER34-1Q9H9K5 563 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 ANAPC7Q9UJX3 599 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 CA5BQ9Y2D0 317 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 SMG1Q96Q15 3661 aaKnown RBP10.19□□□□□ -0.78
CPSF4-213ENST00000484112 KNTC1P50748 2209 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 NBEAQ8NFP9 2946 aa10.19□□□□□ -0.78
CPSF4-213ENST00000484112 COL5A1P20908 1838 aaPredicted RBP10.19□□□□□ -0.78
CPSF4-213ENST00000484112 DOCK4Q8N1I0 1966 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 IGSF10Q6WRI0 2623 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 TRIM38O00635 465 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 SIGLEC6O43699 453 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 ATP9BO43861 1147 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 BNIP3LO60238 219 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 MAGEC1O60732 1142 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 MTA2O94776 668 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 MPOP05164 745 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 ACP1P24666 158 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 EPHB2P29323 1055 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 MIPP30301 263 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 CYLC1P35663 651 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-213ENST00000484112 GGCXP38435 758 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 E2F1Q01094 437 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 GNA12Q03113 381 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 ELAVL3Q14576 367 aaKnown RBP10.18□□□□□ -0.78
CPSF4-213ENST00000484112 DPYSL2Q16555 572 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 HADHQ16836 314 aaKnown RBP10.18□□□□□ -0.78
CPSF4-213ENST00000484112 PARP15Q460N3 678 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 ACCSLQ4AC99 568 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 RWDD4Q6NW29 188 aaKnown RBP10.18□□□□□ -0.78
CPSF4-213ENST00000484112 KANSL1Q7Z3B3 1105 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 DSG4Q86SJ6 1040 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 CIR1Q86X95 450 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-213ENST00000484112 LZTR1Q8N653 840 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 ZNF564Q8TBZ8 553 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-213ENST00000484112 CASKIN2Q8WXE0 1202 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 CHP1Q99653 195 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 MYOCQ99972 504 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 CEP44Q9C0F1 390 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 ZWILCHQ9H900 591 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 TMPRSS4Q9NRS4 437 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 MPP6Q9NZW5 540 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 CTTNBP2NLQ9P2B4 639 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 RCOR3Q9P2K3 495 aaPredicted RBP10.18□□□□□ -0.78
CPSF4-213ENST00000484112 TPX2Q9ULW0 747 aaKnown RBP10.18□□□□□ -0.78
CPSF4-213ENST00000484112 HPCAL4Q9UM19 191 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 AP4E1Q9UPM8 1137 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 NEU3Q9UQ49 428 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 PCDHB1Q9Y5F3 818 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 ITPR1Q14643 2758 aa10.18□□□□□ -0.78
CPSF4-213ENST00000484112 FAM72CH0Y354 149 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 FFAR2O15552 330 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 LATO43561 262 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 RAMP2O60895 175 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 PROSCO94903 275 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 IPO7O95373 1038 aaKnown RBP10.17□□□□□ -0.78
CPSF4-213ENST00000484112 DRD3P35462 400 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 IRAK1P51617 712 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 NDST2P52849 883 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 HADHBP55084 474 aaKnown RBP10.17□□□□□ -0.78
CPSF4-213ENST00000484112 TPI1P60174 286 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 SPA17Q15506 151 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 PROX2Q3B8N5 592 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 RAB6CQ53S08 254 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 ARHGAP40Q5TG30 622 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 FAM72AQ5TYM5 149 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 BROXQ5VW32 411 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 FAM72DQ6L9T8 149 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 PCSK4Q6UW60 755 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 TFAP2DQ7Z6R9 452 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 FAM72BQ86X60 149 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 PLPP6Q8IY26 295 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 UMODL1-AS1Q8N2C9 162 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 TXLNBQ8N3L3 684 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 SLC25A45Q8N413 288 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 SH2D3CQ8N5H7 860 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 ARFGAP1Q8N6T3 406 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 DCBLD1Q8N8Z6 715 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 ZNF248Q8NDW4 579 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 RFFLQ8WZ73 363 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 OR8D1Q8WZ84 308 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 KLK6Q92876 244 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 KLHDC7BQ96G42 594 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 SNRNP25Q9BV90 132 aaKnown RBP10.17□□□□□ -0.78
CPSF4-213ENST00000484112 RAB6CQ9H0N0 254 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 CPNE5Q9HCH3 593 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 ATP13A1Q9HD20 1204 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 VPS51Q9UID3 782 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 SARDHQ9UL12 918 aa10.17□□□□□ -0.78
CPSF4-213ENST00000484112 FARP1Q9Y4F1 1045 aaPredicted RBP10.17□□□□□ -0.78
CPSF4-213ENST00000484112 SNX10Q9Y5X0 201 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms