RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CINPQ9BW66 212 aaPredicted RBP14.21□□□□□ -0.14
CLK3-204ENST00000483723 MUC3BQ9H195 1237 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 ZFATQ9P243 1243 aa14.21□□□□□ -0.14
CLK3-204ENST00000483723 TNRC18O15417 2968 aaPredicted RBP14.2□□□□□ -0.14
CLK3-204ENST00000483723 ATG2AQ2TAZ0 1938 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 CXorf51AA0A1B0GTR3 108 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 HEATR9A2RTY3 570 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 CBX4O00257 560 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 GJB3O75712 270 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 SERPINF2P08697 491 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 DHRS4L1P0CG22 281 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 HLA-DPA1P20036 260 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 CSKP41240 450 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 RGRP47804 291 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 PLK1P53350 603 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 CSE1LP55060 971 aaKnown RBP14.2□□□□□ -0.14
CLK3-204ENST00000483723 IL9RQ01113 521 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 CDK18Q07002 472 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 NSUN2Q08J23 767 aaKnown RBP eCLIP14.2□□□□□ -0.14
CLK3-204ENST00000483723 SIRPB2Q5JXA9 342 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 KIAA0930Q6ICG6 404 aaPredicted RBP14.2□□□□□ -0.14
CLK3-204ENST00000483723 ESRP1Q6NXG1 681 aaKnown RBP14.2□□□□□ -0.14
CLK3-204ENST00000483723 RGS9BPQ6ZS82 235 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 KCNMB4Q86W47 210 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 RASSF3Q86WH2 238 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 CNTN4Q8IWV2 1026 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 SLC25A41Q8N5S1 370 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 DCAF4L2Q8NA75 395 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 TCP10LQ8TDR4 215 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 ACMSDQ8TDX5 336 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 ZNF473Q8WTR7 871 aaKnown RBP14.2□□□□□ -0.14
CLK3-204ENST00000483723 USP13Q92995 863 aaPredicted RBP14.2□□□□□ -0.14
CLK3-204ENST00000483723 ISL2Q96A47 359 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 APOPT1Q96IL0 206 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 NUDCD1Q96RS6 583 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 KLF6Q99612 283 aaPredicted RBP14.2□□□□□ -0.14
CLK3-204ENST00000483723 LMAN2LQ9H0V9 348 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 NOD2Q9HC29 1040 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 C20orf96Q9NUD7 363 aaPredicted RBP14.2□□□□□ -0.14
CLK3-204ENST00000483723 SLC17A6Q9P2U8 582 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 HCFC2Q9Y5Z7 792 aa14.2□□□□□ -0.14
CLK3-204ENST00000483723 MROH6A6NGR9 719 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 GOLGA8RI6L899 631 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 NDUFAB1O14561 156 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 ZNF197O14709 1029 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 PER2O15055 1255 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 INSIG1O15503 277 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 SNAP91O60641 907 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 FGF1P05230 155 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 ALADP13716 330 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 ARNTP27540 789 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 AVPR1AP37288 418 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 ETV4P43268 484 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 BMPR2Q13873 1038 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 ZSCAN26Q16670 478 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 HSP90AA5PQ58FG0 334 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 MROH9Q5TGP6 573 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 KDELC2Q7Z4H8 507 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 RIN3Q8TB24 985 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 DDI1Q8WTU0 396 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 DYDC1Q8WWB3 177 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 RBBP8Q99708 897 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 SMG9Q9H0W8 520 aaKnown RBP14.19□□□□□ -0.14
CLK3-204ENST00000483723 MLXIPLQ9NP71 852 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 TDP1Q9NUW8 608 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 NSMCE4AQ9NXX6 385 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 IL1RAPL1Q9NZN1 696 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 KIAA1522Q9P206 1035 aaPredicted RBP14.19□□□□□ -0.14
CLK3-204ENST00000483723 CCL26Q9Y258 94 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 ARIH1Q9Y4X5 557 aaPredicted RBP14.19□□□□□ -0.14
CLK3-204ENST00000483723 PDE4DIPQ5VU43 2346 aa14.19□□□□□ -0.14
CLK3-204ENST00000483723 CCDC195A0A1B0GUA6 201 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 NDST3O95803 873 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 ITGA2BP08514 1039 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 WEE1P30291 646 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 FOXN2P32314 431 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 SPRP35270 261 aaPredicted RBP14.18□□□□□ -0.14
CLK3-204ENST00000483723 MAGEA12P43365 314 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 NTHL1P78549 312 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 CDH18Q13634 790 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 RALGPS1Q5JS13 557 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 TSTD2Q5T7W7 516 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 NLRP9Q7RTR0 991 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 ADGRD2Q7Z7M1 963 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 MFN1Q8IWA4 741 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 LRRC34Q8IZ02 419 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 PEX13Q92968 403 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 ACDQ96AP0 544 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 AGAP2Q99490 1192 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 RABEP2Q9H5N1 569 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 LHX3Q9UBR4 397 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 VPS51Q9UID3 782 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 RIMKLBQ9ULI2 386 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 GRID1Q9ULK0 1009 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 CLEC4EQ9ULY5 219 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 TMCC1O94876 653 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 PRLP01236 227 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 TAC1P20366 129 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 CRHR1P34998 444 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 PBX2P40425 430 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms