RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 NOMO3P69849 1222 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 CFHR1Q03591 330 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 SGCGQ13326 291 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 KLHDC7AQ5VTJ3 777 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 ZNF605Q86T29 641 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 SLC35F3Q8IY50 421 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 CCDC185Q8N715 623 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 JOSD2Q8TAC2 188 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 GPT2Q8TD30 523 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 EPS8L1Q8TE68 723 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 IFT43Q96FT9 208 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 HAPLN3Q96S86 360 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 TUBGCP2Q9BSJ2 902 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 WRAP53Q9BUR4 548 aaKnown RBP14.13□□□□□ -0.15
VARS-226ENST00000483275 LRRC61Q9BV99 259 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 C1QTNF2Q9BXJ5 285 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 WDR70Q9NW82 654 aa14.13□□□□□ -0.15
VARS-226ENST00000483275 APOBEC3BQ9UH17 382 aaKnown RBP14.13□□□□□ -0.15
VARS-226ENST00000483275 F8VZ95 297 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 AP1G1O43747 822 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 MMP20O60882 483 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 DXOO77932 396 aaKnown RBP14.12□□□□□ -0.15
VARS-226ENST00000483275 GFPT2O94808 682 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 SCNN1AP37088 669 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 DUSP3P51452 185 aaPredicted RBP14.12□□□□□ -0.15
VARS-226ENST00000483275 PDX1P52945 283 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 ADKP55263 362 aaKnown RBP14.12□□□□□ -0.15
VARS-226ENST00000483275 BPIFB4P59827 614 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 ZNF805Q5CZA5 627 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 PRRT3Q5FWE3 981 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 MANEALQ5VSG8 457 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 BROXQ5VW32 411 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 KIAA1614Q5VZ46 1190 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 ZNF783Q6ZMS7 281 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 NLRP14Q86W24 1093 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 PHACTR4Q8IZ21 702 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 SLC30A5Q8TAD4 765 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 RXFP2Q8WXD0 754 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 ARHGEF2Q92974 986 aaKnown RBP14.12□□□□□ -0.15
VARS-226ENST00000483275 KLHL32Q96NJ5 620 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 C11orf70Q9BRQ4 267 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 DUSP23Q9BVJ7 150 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 NAA15Q9BXJ9 866 aaKnown RBP14.12□□□□□ -0.15
VARS-226ENST00000483275 KLC2Q9H0B6 622 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 MBNL1Q9NR56 388 aaKnown RBP14.12□□□□□ -0.15
VARS-226ENST00000483275 SIRPGQ9P1W8 387 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 OR12D3Q9UGF7 316 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 COQ6Q9Y2Z9 468 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 ENTPD2Q9Y5L3 495 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 AHCTF1Q8WYP5 2266 aa14.12□□□□□ -0.15
VARS-226ENST00000483275 SCN8AQ9UQD0 1980 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 LRIG2O94898 1065 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 LSM8O95777 96 aaKnown RBP14.11□□□□□ -0.15
VARS-226ENST00000483275 UCHL3P15374 230 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 THOP1P52888 689 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 PFN3P60673 137 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 NR0B2Q15466 257 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 CCDC14Q49A88 953 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 RBM44Q6ZP01 1051 aaKnown RBP14.11□□□□□ -0.15
VARS-226ENST00000483275 ZNF354CQ86Y25 554 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 DCP2Q8IU60 420 aaKnown RBP14.11□□□□□ -0.15
VARS-226ENST00000483275 PYROXD2Q8N2H3 581 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 KYQ8NBH2 561 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 OR2AP1Q8NGE2 309 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 PRR11Q96HE9 360 aaPredicted RBP14.11□□□□□ -0.15
VARS-226ENST00000483275 EXOC2Q96KP1 924 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 IL12RB2Q99665 862 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 CLPBQ9H078 707 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 USP29Q9HBJ7 922 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 THSD1Q9NS62 852 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 SAMSN1Q9NSI8 373 aaKnown RBP14.11□□□□□ -0.15
VARS-226ENST00000483275 TAB2Q9NYJ8 693 aa14.11□□□□□ -0.15
VARS-226ENST00000483275 PPARGC1AQ9UBK2 798 aaKnown RBP14.11□□□□□ -0.15
VARS-226ENST00000483275 NOCTQ9UK39 431 aaKnown RBP14.11□□□□□ -0.15
VARS-226ENST00000483275 ERVH48-1M5A8F1 160 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 INSIG1O15503 277 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 TSPAN6O43657 245 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 TMCC1O94876 653 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 TSHRP16473 764 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 RHOQP17081 205 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 CHRNB2P17787 502 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 ADRA1BP35368 520 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 ERVPABLB-1P60509 514 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 SLC20A2Q08357 652 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 POLD3Q15054 466 aaPredicted RBP14.1□□□□□ -0.15
VARS-226ENST00000483275 IRF4Q15306 451 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 KCTD16Q68DU8 428 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 B3GNT8Q7Z7M8 397 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 MLKLQ8NB16 471 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 CENPTQ96BT3 561 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 EPAS1Q99814 870 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 CCDC3Q9BQI4 270 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 BOCQ9BWV1 1114 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 GANQ9H2C0 597 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 NOL6Q9H6R4 1146 aaKnown RBP14.1□□□□□ -0.15
VARS-226ENST00000483275 EVA1BQ9NVM1 165 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 TMEM248Q9NWD8 314 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 RABGEF1Q9UJ41 708 aa14.1□□□□□ -0.15
VARS-226ENST00000483275 EME2A4GXA9 379 aaPredicted RBP14.09□□□□□ -0.15
VARS-226ENST00000483275 AREL1O15033 823 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms