RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 CCDC14Q49A88 953 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 FAM219BQ5XKK7 198 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 OR6B2Q6IFH4 312 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 DPH6Q7L8W6 267 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 MCF2L2Q86YR7 1114 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 BRSK2Q8IWQ3 736 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 CMTR2Q8IYT2 770 aaKnown RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 COLGALT1Q8NBJ5 622 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 SHCBP1Q8NEM2 672 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 USP33Q8TEY7 942 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 LHPPQ9H008 270 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 UPF3AQ9H1J1 476 aaKnown RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 DEFB129Q9H1M3 183 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 RAD21L1Q9H4I0 556 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 PCDH12Q9NPG4 1184 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 CCM2LQ9NUG4 571 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-205ENST00000483122 SPO11Q9Y5K1 396 aa11.94□□□□□ -0.5
VTI1A-205ENST00000483122 SCN9AQ15858 1988 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 H0YCG3 227 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 M0QYV0 167 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 EI24O14681 340 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 ACOX3O15254 700 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 GMNNO75496 209 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 SEC14L2O76054 403 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 NCAM1P13591 858 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 PTPN2P17706 415 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 TGM1P22735 817 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 ELK4P28324 431 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 EEF1DP29692 281 aaKnown RBP11.93□□□□□ -0.5
VTI1A-205ENST00000483122 TFAMQ00059 246 aaKnown RBP11.93□□□□□ -0.5
VTI1A-205ENST00000483122 STX5Q13190 355 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 HEATR6Q6AI08 1181 aaKnown RBP11.93□□□□□ -0.5
VTI1A-205ENST00000483122 FAM183BPQ6ZVS7 135 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 FRA10AC1Q70Z53 315 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 WDR49Q8IV35 697 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 COLGALT2Q8IYK4 626 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 CPXCR1Q8N123 301 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 PELI3Q8N2H9 469 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 KDM1BQ8NB78 822 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 CNDP2Q96KP4 475 aaKnown RBP11.93□□□□□ -0.5
VTI1A-205ENST00000483122 QKIQ96PU8 341 aaKnown RBP eCLIP11.93□□□□□ -0.5
VTI1A-205ENST00000483122 SEZ6LQ9BYH1 1024 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 XYLT2Q9H1B5 865 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 AGPAT4Q9NRZ5 378 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 ANKMY1Q9P2S6 941 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 TIMM22Q9Y584 194 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 SNX9Q9Y5X1 595 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 GOLGB1Q14789 3259 aaKnown RBP11.93□□□□□ -0.5
VTI1A-205ENST00000483122 DOCK5Q9H7D0 1870 aa11.93□□□□□ -0.5
VTI1A-205ENST00000483122 ANKRD34BA5PLL1 514 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 PSMD11O00231 422 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 MRASO14807 208 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 MAFGO15525 162 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 MSI1O43347 362 aaKnown RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 SRP72O76094 671 aaKnown RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 PIGRP01833 764 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 SAT1P21673 171 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 EEF1B2P24534 225 aaKnown RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 CAPGP40121 348 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 HK2P52789 917 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 NKX2-5P52952 324 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 PRKCEQ02156 737 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 FASTKQ14296 549 aaKnown RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 CYBRD1Q53TN4 286 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 SAMD4BQ5PRF9 694 aaKnown RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 SAPCD2Q86UD0 394 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 SPPL2CQ8IUH8 684 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 DHRSXQ8N5I4 330 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 SGCDQ92629 289 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 ZNF669Q96BR6 464 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 SCYL1Q96KG9 808 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 C9orf16Q9BUW7 83 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 GPN2Q9H9Y4 310 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 SCUBE2Q9NQ36 999 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 SLCO1B7G3V0H7 640 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 TOR1BO14657 336 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 SYNCRIPO60506 623 aaKnown RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 POLBP06746 335 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 MBL2P11226 248 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 LRPAP1P30533 357 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 GPD2P43304 727 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 HNRNPFP52597 415 aaKnown RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 MPP1Q00013 466 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 EMC2Q15006 297 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 BOLA3Q53S33 107 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 XAF1Q6GPH4 301 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 SPRED1Q7Z699 444 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 ANKRD13BQ86YJ7 626 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 CCNYL1Q8N7R7 359 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 RAB2BQ8WUD1 216 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 LRCH3Q96II8 777 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 MAELQ96JY0 434 aaKnown RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 GLIS2Q9BZE0 524 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 TDRD3Q9H7E2 651 aaKnown RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 CD320Q9NPF0 282 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 PKD2L2Q9NZM6 624 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 EGFL7Q9UHF1 273 aa11.92□□□□□ -0.5
VTI1A-205ENST00000483122 MAGED2Q9UNF1 606 aaPredicted RBP11.92□□□□□ -0.5
VTI1A-205ENST00000483122 A0A0A0MRY4 1105 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms