RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 FAM90A20PA6NIJ5 464 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 CBX6O95503 412 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 CGAP01215 116 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 ARSAP15289 507 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 SKIV2L2P42285 1042 aaKnown RBP3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 CCT5P48643 541 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 RPS6KA3P51812 740 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 POU5F1Q01860 360 aaKnown RBP3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 CYP4A11Q02928 519 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 BTKQ06187 659 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 DDR1Q08345 913 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 ACSM2AQ08AH3 577 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 GALNT1Q10472 559 aaPredicted RBP3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 MRGPRG-AS1Q2M3A8 158 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 XKR9Q5GH70 373 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 DGAT2L7PQ6IED9 249 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 LIN54Q6MZP7 749 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 RHBDF2Q6PJF5 856 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 KLHL17Q6TDP4 642 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 DSTYKQ6XUX3 929 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 CCDC117Q8IWD4 279 aaPredicted RBP3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 PGBD5Q8N414 524 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 PTGR2Q8N8N7 351 aaPredicted RBP3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 POC1AQ8NBT0 407 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 ZNF114Q8NC26 417 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 WBP1Q96G27 269 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 HES6Q96HZ4 224 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 SCLT1Q96NL6 688 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 IL17FQ96PD4 163 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 MSTO1Q9BUK6 570 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 CXorf56Q9H5V9 222 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 PPCSQ9HAB8 311 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 THAP1Q9NVV9 213 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 NDUFAF4Q9P032 175 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 PGAP2Q9UHJ9 254 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 SLC45A1Q9Y2W3 748 aa3.24□□□□□ -1.89
LAPTM4A-202ENST00000483117 A0A087WV62 115 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 A0A0U1RQG5 324 aaPredicted RBP3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 A0A0U1RQJ8 604 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 ABHD14A-ACY1A0A1B0GW23 586 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 PRAC2D3DTV9 90 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 NPIPB11E5RHQ5 1161 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 F5H423 210 aaPredicted RBP3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 TIMM23O14925 209 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 TIMM44O43615 452 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 LMX1BO60663 402 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 MCCP23508 829 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 YWHAQP27348 245 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 PDIA3P30101 505 aaKnown RBP3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 COPB2P35606 906 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 ARL16Q0P5N6 197 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 DLG1Q12959 904 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 FAM83BQ5T0W9 1011 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 ANO1Q5XXA6 986 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 SULT6B1Q6IMI4 303 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 ZNF449Q6P9G9 518 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 PATL1Q86TB9 770 aaKnown RBP3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 ZNF354CQ86Y25 554 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 MYLK4Q86YV6 388 aaPredicted RBP3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 TMC8Q8IU68 726 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 PDILTQ8N807 584 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 ANKRD42Q8N9B4 389 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 ATG16L2Q8NAA4 619 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 NEK9Q8TD19 979 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 TBC1D22AQ8WUA7 517 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 TRAPPC9Q96Q05 1148 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 HERC2P3Q9BVR0 1158 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 MVB12BQ9H7P6 319 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 GRHL1Q9NZI5 618 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 NLKQ9UBE8 527 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 FBXO2Q9UK22 296 aaPredicted RBP3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 DHDHQ9UQ10 334 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 LRCH1Q9Y2L9 728 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 NFS1Q9Y697 457 aa3.23□□□□□ -1.89
LAPTM4A-202ENST00000483117 CCER2I3L3R5 266 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 TULP2O00295 520 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 SYT5O00445 386 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 CHL1O00533 1208 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 CLGNO14967 610 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 STRNO43815 780 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 XPNPEP2O43895 674 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 ZNF500O60304 480 aaPredicted RBP3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 CH25HO95992 272 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 TFRCP02786 760 aaKnown RBP3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 DCTDP32321 178 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 SERPINF1P36955 418 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 RPL3P39023 403 aaKnown RBP3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 PTPN9P43378 593 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 ADORA2A-AS1P86434 159 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 DHX34Q14147 1143 aaKnown RBP3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 AP5B1Q2VPB7 878 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 STPG1Q5TH74 334 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 PGBD2Q6P3X8 592 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 SYT13Q7L8C5 426 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 SMIM29Q86T20 159 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 OR4N2Q8NGD1 307 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 RASSF8Q8NHQ8 419 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 RFWD2Q8NHY2 731 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 BICD1Q96G01 975 aa3.22□□□□□ -1.89
LAPTM4A-202ENST00000483117 SCMH1Q96GD3 660 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms