RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 CSF2P04141 144 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CALB1P05937 261 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 EPHB2P29323 1055 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 LRRC73Q5JTD7 316 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 GDPD4Q6W3E5 623 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 PARGQ86W56 976 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 PHF13Q86YI8 300 aaPredicted RBP16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 C3orf20Q8ND61 904 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ANKRD20A12PQ8NF67 263 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 FGF11Q92914 225 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 NTAN1Q96AB6 310 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 DUSP23Q9BVJ7 150 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ABCG4Q9H172 646 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 GPR27Q9NS67 375 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 KLF15Q9UIH9 416 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 DAAM1Q9Y4D1 1078 aa16.82■□□□□ 0.28
RAB11FIP3-209ENST00000483002 PTPRQQ9UMZ3 2332 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 SHROOM3Q8TF72 1996 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ZSCAN5CA6NGD5 496 aaPredicted RBP16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 EIF4E1BA6NMX2 242 aaKnown RBP16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 SPINT1O43278 529 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CREB3O43889 395 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 TMCC1O94876 653 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 NME1P15531 152 aaKnown RBP16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 JUNDP17535 347 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CDK11BP21127 795 aaKnown RBP16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 DUSP3P51452 185 aaPredicted RBP16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 UBXN1Q04323 297 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 TPRG1LQ5T0D9 272 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CLEC17AQ6ZS10 378 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ZSCAN30Q86W11 494 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 FAM181AQ8N9Y4 354 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ZNF548Q8NEK5 533 aaPredicted RBP16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 BAP1Q92560 729 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 VOPP1Q96AW1 172 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ARHGEF26Q96DR7 871 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 GDAP1L1Q96MZ0 367 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 OSBPL1AQ9BXW6 950 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 KLC2Q9H0B6 622 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 NOL6Q9H6R4 1146 aaKnown RBP16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 EVA1BQ9NVM1 165 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 LIMA1Q9UHB6 759 aaKnown RBP16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 PCDHB1Q9Y5F3 818 aa16.81■□□□□ 0.28
RAB11FIP3-209ENST00000483002 LY6G6EA0A0G2JKS1 128 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CPED1A4D0V7 1026 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ANKRD62A6NC57 917 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 LGALS16A8MUM7 142 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CCP110O43303 1012 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 MMP20O60882 483 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ITIH2P19823 946 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ACTN2P35609 894 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 GSCP56915 257 aaPredicted RBP16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 RHOAP61586 193 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 RPL7AP62424 266 aaKnown RBP16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 RAD51Q06609 339 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 DEFB133Q30KQ1 61 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 EFHC2Q5JST6 749 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 DNAJC24Q6P3W2 148 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 SASS6Q6UVJ0 657 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 VPS36Q86VN1 386 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 RTL3Q8N8U3 475 aaKnown RBP16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 LMX1AQ8TE12 382 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ASB12Q8WXK4 309 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 MCEEQ96PE7 176 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 AGPAT1Q99943 283 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 TTYH3Q9C0H2 523 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 RAI2Q9Y5P3 530 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CSNK1G3Q9Y6M4 447 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 U3KQA8 63 aa16.8■□□□□ 0.28
RAB11FIP3-209ENST00000483002 RASA4BC9J798 803 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 AREL1O15033 823 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 AQP9O43315 295 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 RASA4O43374 803 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 IGSF6O95976 241 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 MPOP05164 745 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 GP1BAP07359 652 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ZNF143P52747 638 aaPredicted RBP16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 THOP1P52888 689 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 YBEYP58557 167 aaPredicted RBP16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 PFN3P60673 137 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 C1QBPQ07021 282 aaKnown RBP16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CCDC173Q0VFZ6 552 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 EIF2B5Q13144 721 aaKnown RBP16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CDKN3Q16667 212 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 TBC1D25Q3MII6 688 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 INO80DQ53TQ3 878 aaPredicted RBP16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CDCP2Q5VXM1 449 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 ZCCHC8Q6NZY4 707 aaKnown RBP16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 RBM43Q6ZSC3 357 aaKnown RBP16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 MON1BQ7L1V2 547 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 DENND6BQ8NEG7 585 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 SNIP1Q8TAD8 396 aaKnown RBP16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 IFI44Q8TCB0 444 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 MAPK15Q8TD08 544 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 CENPTQ96BT3 561 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 HMCESQ96FZ2 354 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 DEPDC7Q96QD5 511 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 IL12RB2Q99665 862 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 EPAS1Q99814 870 aa16.79■□□□□ 0.28
RAB11FIP3-209ENST00000483002 USP29Q9HBJ7 922 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms