RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 MYLK3Q32MK0 819 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 PARP15Q460N3 678 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 KIAA1161Q6NSJ0 714 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 NEK5Q6P3R8 708 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 GDPD4Q6W3E5 623 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 CCNI2Q6ZMN8 369 aaPredicted RBP10.62□□□□□ -0.71
CPSF4-212ENST00000482251 Q6ZSR6 202 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 CYP4V2Q6ZWL3 525 aaPredicted RBP10.62□□□□□ -0.71
CPSF4-212ENST00000482251 TMPRSS7Q7RTY8 843 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 KANSL1Q7Z3B3 1105 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 NPWQ8N729 165 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 CPLX3Q8WVH0 158 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 VCPIP1Q96JH7 1222 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.62□□□□□ -0.71
CPSF4-212ENST00000482251 WRAP53Q9BUR4 548 aaKnown RBP10.62□□□□□ -0.71
CPSF4-212ENST00000482251 SLC17A9Q9BYT1 436 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 ERVMER34-1Q9H9K5 563 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 DNAJC28Q9NX36 388 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 LHX3Q9UBR4 397 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 UBA2Q9UBT2 640 aaPredicted RBP10.62□□□□□ -0.71
CPSF4-212ENST00000482251 MFHAS1Q9Y4C4 1052 aa10.62□□□□□ -0.71
CPSF4-212ENST00000482251 FAM221BA6H8Z2 402 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 TMEM191CA6NGB0 347 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 WASH4PA8MWX3 477 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 DFFAO00273 331 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 TRIM38O00635 465 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 DAPK3O43293 454 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 AP1G1O43747 822 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 LRCH4O75427 683 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 RNF8O76064 485 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 POP4O95707 220 aaKnown RBP10.61□□□□□ -0.71
CPSF4-212ENST00000482251 PRKCGP05129 697 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 MYF5P13349 255 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 RXRGP48443 463 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 UBASH3AP57075 661 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 YBEYP58557 167 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-212ENST00000482251 SEMG2Q02383 582 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 CYTH1Q15438 398 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 TPRG1LQ5T0D9 272 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 ERMARDQ5T6L9 678 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 PPP1R2P3Q6NXS1 205 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 KYAT3Q6YP21 454 aaKnown RBP10.61□□□□□ -0.71
CPSF4-212ENST00000482251 ARHGAP36Q6ZRI8 547 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 RFX8Q6ZV50 586 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 ABI3BPQ7Z7G0 1075 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 TTC7BQ86TV6 843 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 VPS36Q86VN1 386 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 TP53INP2Q8IXH6 220 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 UMODL1-AS1Q8N2C9 162 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 FEM1CQ96JP0 617 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 BTBD6Q96KE9 485 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 BMFQ96LC9 184 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 OSBPL1AQ9BXW6 950 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 SLC39A8Q9C0K1 460 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 RETREG1Q9H6L5 497 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 LRRC19Q9H756 370 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 ZWILCHQ9H900 591 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 PDFQ9HBH1 243 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 IFNKQ9P0W0 207 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 COQ6Q9Y2Z9 468 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 SCINQ9Y6U3 715 aa10.61□□□□□ -0.71
CPSF4-212ENST00000482251 TDRD6O60522 2096 aaKnown RBP10.61□□□□□ -0.71
CPSF4-212ENST00000482251 CELSR3Q9NYQ7 3312 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 GOLGA6L19H0YKK7 550 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 TAF4O00268 1085 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 TSPAN6O43657 245 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 SIGLEC6O43699 453 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 MMP20O60882 483 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 PIAS2O75928 621 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 NEBLO76041 1014 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 GZMAP12544 262 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 ERCC2P18074 760 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 XPAP23025 273 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-212ENST00000482251 DGKAP23743 735 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 IL1R2P27930 398 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 IGFALSP35858 605 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 GJC1P36383 396 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 PBX1P40424 430 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 RGRP47804 291 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 PAPOLAP51003 745 aaKnown RBP10.6□□□□□ -0.71
CPSF4-212ENST00000482251 RAD51Q06609 339 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 SGCGQ13326 291 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 PDE1CQ14123 709 aaPredicted RBP10.6□□□□□ -0.71
CPSF4-212ENST00000482251 TCEA2Q15560 299 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 ZSCAN23Q3MJ62 389 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 HES3Q5TGS1 186 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 HGSNATQ68CP4 663 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 PROSER1Q86XN7 944 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 ARHGAP12Q8IWW6 846 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 PLPP6Q8IY26 295 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 GALNT15Q8N3T1 639 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 SLC25A45Q8N413 288 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 CXorf40AQ8TE69 158 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 HSPH1Q92598 858 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 TRIM11Q96F44 468 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 LRIG1Q96JA1 1093 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 THAP2Q9H0W7 228 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 CCDC86Q9H6F5 360 aaKnown RBP10.6□□□□□ -0.71
CPSF4-212ENST00000482251 SP110Q9HB58 689 aa10.6□□□□□ -0.71
CPSF4-212ENST00000482251 KLHL11Q9NVR0 708 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms