RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 TMF1P82094 1093 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 TAP1Q03518 808 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 ALCAMQ13740 583 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 PPP2R5BQ15173 497 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 RABL3Q5HYI8 236 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 SPDYAQ5MJ70 313 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 RAPH1Q70E73 1250 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 UNC45BQ8IWX7 931 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 KIF18AQ8NI77 898 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 GDPD5Q8WTR4 605 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 PABPC5Q96DU9 382 aaKnown RBP5.53□□□□□ -1.52
COPA-203ENST00000481040 ELMOD3Q96FG2 381 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 FAM89AQ96GI7 184 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 PBKQ96KB5 322 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 NAP1L5Q96NT1 182 aaPredicted RBP5.53□□□□□ -1.52
COPA-203ENST00000481040 KIFC3Q9BVG8 833 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 CCDC106Q9BWC9 280 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 KLC2Q9H0B6 622 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 OSGEPL1Q9H4B0 414 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 PDZD7Q9H5P4 517 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 PFDN4Q9NQP4 134 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 ASNSD1Q9NWL6 643 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 ARHGEF38Q9NXL2 777 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 PLK2Q9NYY3 685 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 CTNNAL1Q9UBT7 734 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 KNSTRNQ9Y448 316 aa5.53□□□□□ -1.52
COPA-203ENST00000481040 ZNF536O15090 1300 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 SPATA31A1Q5TZJ5 1347 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 LOC100509620A0A075B734 347 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 C19orf81C9J6K1 198 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 QSOX1O00391 747 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 CHL1O00533 1208 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 YY2O15391 372 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 SLC25A12O75746 678 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 SPDEFO95238 335 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 HLA-DQA2P01906 255 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 SRPRAP08240 638 aaKnown RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 NR2F6P10588 404 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 SLC2A4P14672 509 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 TMEM11P17152 192 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 ENGP17813 658 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 TRIM21P19474 475 aaKnown RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 EDN2P20800 178 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 ACO1P21399 889 aaKnown RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 PON1P27169 355 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 PCSK6P29122 969 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 ZNF84P51523 738 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 COPB1P53618 953 aaKnown RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 GALCP54803 685 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 UBXN1Q04323 297 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 ZBTB16Q05516 673 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 DMWDQ09019 674 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 SLMAPQ14BN4 828 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 PTPRRQ15256 657 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 PKN2Q16513 984 aaKnown RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 HIST2H2ACQ16777 129 aaPredicted RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 GLE1Q53GS7 698 aaKnown RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 ARL13AQ5H913 290 aaPredicted RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 CAVIN1Q6NZI2 390 aaKnown RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 ZNF449Q6P9G9 518 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 LINC01465Q8N7H1 131 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 MRPS27Q92552 414 aaKnown RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 SGCDQ92629 289 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 FAM162AQ96A26 154 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 ARHGEF26Q96DR7 871 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 FBXL20Q96IG2 436 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 ADAD1Q96M93 576 aaKnown RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 OR2A14Q96R47 310 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 NAA11Q9BSU3 229 aaPredicted RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 TRIM2Q9C040 744 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 DNAI2Q9GZS0 605 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 HRH4Q9H3N8 390 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 PLK3Q9H4B4 646 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 COPS7BQ9H9Q2 264 aaPredicted RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 RANGRFQ9HD47 186 aaPredicted RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 TXNRD2Q9NNW7 524 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 DUSP22Q9NRW4 184 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 SETD4Q9NVD3 440 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 TBCCD1Q9NVR7 557 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 DLL3Q9NYJ7 618 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 ICKQ9UPZ9 632 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 BTBD3Q9Y2F9 522 aa5.52□□□□□ -1.53
COPA-203ENST00000481040 HEMK1Q9Y5R4 338 aaPredicted RBP5.52□□□□□ -1.53
COPA-203ENST00000481040 TCRBV7S3A2A0A539 114 aa5.51□□□□□ -1.53
COPA-203ENST00000481040 TCRBV21S2A2A0A5A6 115 aa5.51□□□□□ -1.53
COPA-203ENST00000481040 TARSL2A2RTX5 802 aaKnown RBP5.51□□□□□ -1.53
COPA-203ENST00000481040 TMEM247A6NEH6 219 aa5.51□□□□□ -1.53
COPA-203ENST00000481040 UNC119BA6NIH7 251 aa5.51□□□□□ -1.53
COPA-203ENST00000481040 WDR46O15213 610 aaKnown RBP5.51□□□□□ -1.53
COPA-203ENST00000481040 HCRTR2O43614 444 aa5.51□□□□□ -1.53
COPA-203ENST00000481040 FMO6PO60774 539 aa5.51□□□□□ -1.53
COPA-203ENST00000481040 DIAPH2O60879 1101 aa5.51□□□□□ -1.53
COPA-203ENST00000481040 MITFO75030 526 aaPredicted RBP5.51□□□□□ -1.53
COPA-203ENST00000481040 IL1AP01583 271 aa5.51□□□□□ -1.53
COPA-203ENST00000481040 TFP02787 698 aa5.51□□□□□ -1.53
COPA-203ENST00000481040 HOXB5P09067 269 aa5.51□□□□□ -1.53
COPA-203ENST00000481040 APEHP13798 732 aaKnown RBP5.51□□□□□ -1.53
COPA-203ENST00000481040 FDPSP14324 419 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms