RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 CPSF6Q16630 551 aaKnown RBP eCLIP5.34□□□□□ -1.55
CAPN9-204ENST00000480004 SETMARQ53H47 684 aaPredicted RBP5.34□□□□□ -1.55
CAPN9-204ENST00000480004 C10orf120Q5SQS8 335 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 TMEM215Q68D42 235 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 ZCCHC8Q6NZY4 707 aaKnown RBP5.34□□□□□ -1.55
CAPN9-204ENST00000480004 CHST9Q7L1S5 443 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 ZNF765Q7L2R6 523 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 KCNK18Q7Z418 384 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 THNSL2Q86YJ6 484 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 JAMLQ86YT9 394 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 FBXO39Q8N4B4 442 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 C4orf32Q8N8J7 132 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 KDM1BQ8NB78 822 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 TMEM145Q8NBT3 493 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 OR14C36Q8NHC7 312 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 NAT6Q93015 286 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 CLUHP3Q96NS8 147 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 CATSPER2Q96P56 530 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 REEP2Q9BRK0 252 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 MTMR12Q9C0I1 747 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 STRADBQ9C0K7 418 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 ZHX3Q9H4I2 956 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 INTS13Q9NVM9 706 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 SFMBT1Q9UHJ3 866 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 SIX4Q9UIU6 781 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 VPS4AQ9UN37 437 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 SCML2Q9UQR0 700 aa5.34□□□□□ -1.55
CAPN9-204ENST00000480004 ARID1BQ8NFD5 2236 aaPredicted RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 CACNA1DQ01668 2161 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 UBE4BO95155 1302 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 NPHP3-ACAD11A0A0J9YXS1 232 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 A0A1W2PNU3 283 aaPredicted RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 CPED1A4D0V7 1026 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 EME2A4GXA9 379 aaPredicted RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 PP2D1A8MPX8 630 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 C10orf142B7Z368 130 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 K7ESM1 405 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 CLDN5O00501 218 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 WNT9AO14904 365 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 MID1O15344 667 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 SLC7A4O43246 635 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 CTDNEP1O95476 244 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 KLKB1P03952 638 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 ASLP04424 464 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 F13BP05160 661 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 SNRPB2P08579 225 aaKnown RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 JMJD7P0C870 316 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 CDK11BP21127 795 aaKnown RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 CORO1AP31146 461 aaKnown RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 POLE2P56282 527 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 HNRNPKP61978 463 aaKnown RBP eCLIP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 AMPD3Q01432 767 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 KCNMA1Q12791 1236 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 SPIDRQ14159 915 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 CLCA4Q14CN2 919 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 SF1Q15637 639 aaKnown RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 C21orf62-AS1Q17RA5 79 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 BMT2Q1RMZ1 405 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 WDR72Q3MJ13 1102 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 MBLAC2Q68D91 279 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 RAB11FIP2Q7L804 512 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 ZNF720Q7Z2F6 126 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 MAMDC2Q7Z304 686 aaPredicted RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 ADIPOR2Q86V24 386 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 GPBP1Q86WP2 473 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 DCP2Q8IU60 420 aaKnown RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 MMAAQ8IVH4 418 aaKnown RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 ZNF366Q8N895 744 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 C9orf43Q8TAL5 461 aaPredicted RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 PTPRN2Q92932 1015 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 MIB2Q96AX9 1013 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 ARRDC3Q96B67 414 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 TMEM159Q96B96 161 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 TMA16Q96EY4 203 aaKnown RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 CALML4Q96GE6 196 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 ACCSQ96QU6 501 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 MRPL45Q9BRJ2 306 aaKnown RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 FUCA2Q9BTY2 467 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 MMTAG2Q9BU76 263 aaKnown RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 TRIM39Q9HCM9 518 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 TMEM30AQ9NV96 361 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 CLIC5Q9NZA1 410 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 GGA2Q9UJY4 613 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 AGO1Q9UL18 857 aaKnown RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 GPR55Q9Y2T6 319 aaPredicted RBP5.33□□□□□ -1.56
CAPN9-204ENST00000480004 PCDHA5Q9Y5H7 936 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 ST14Q9Y5Y6 855 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 CSNK1G3Q9Y6M4 447 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 ABCA12Q86UK0 2595 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 C2CD3Q4AC94 2353 aa5.33□□□□□ -1.56
CAPN9-204ENST00000480004 A0A1W2PQ27 194 aa5.32□□□□□ -1.56
CAPN9-204ENST00000480004 A0A1W2PQ64 194 aa5.32□□□□□ -1.56
CAPN9-204ENST00000480004 A0A1W2PQC6 194 aa5.32□□□□□ -1.56
CAPN9-204ENST00000480004 ZNF233A6NK53 670 aa5.32□□□□□ -1.56
CAPN9-204ENST00000480004 TISP43B9A030 160 aa5.32□□□□□ -1.56
CAPN9-204ENST00000480004 TPP1O14773 563 aa5.32□□□□□ -1.56
CAPN9-204ENST00000480004 GSC2O15499 205 aa5.32□□□□□ -1.56
CAPN9-204ENST00000480004 CENPBP07199 599 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms