RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 A0A1W2PQF6 199 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 TSPAN11A1L157 253 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 GOLGA6CA6NDK9 693 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 GOLGA6BA6NDN3 693 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 FAM170BA6NMN3 283 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 SMAPO00193 183 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 RIOK3O14730 519 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 ATG13O75143 517 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 AP2A1O95782 977 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 GOLGA6DP0CG33 693 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 HOXB2P14652 356 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 TPSB2P20231 275 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 CA4P22748 312 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 CD86P42081 329 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 SCNN1BP51168 640 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 DRG2P55039 364 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 GEMP55040 296 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 GPS1Q13098 491 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 PRPSAP1Q14558 356 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 IHHQ14623 411 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 STARD3Q14849 445 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 TPSAB1Q15661 275 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 MYLK3Q32MK0 819 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 DUPD1Q68J44 220 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 CCDC70Q6NSX1 233 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 KDELC1Q6UW63 502 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 Q6ZS52 159 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 SYT13Q7L8C5 426 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 DSG4Q86SJ6 1040 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 PRUNE1Q86TP1 453 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 ZNF366Q8N895 744 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 TMIEQ8NEW7 156 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 OR8D1Q8WZ84 308 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 RUBCNQ92622 972 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 LRRC45Q96CN5 670 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 NSMCE3Q96MG7 304 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 LRRC1Q9BTT6 524 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 MLPHQ9BV36 600 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 TDRD1Q9BXT4 1180 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 OSBPL1AQ9BXW6 950 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 ATP13A3Q9H7F0 1226 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 LMAN1LQ9HAT1 526 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 NOD2Q9HC29 1040 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 RAB6BQ9NRW1 208 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 GOLGA6AQ9NYA3 693 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 ASIC3Q9UHC3 531 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 FAM153AQ9UHL3 310 aa12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 UTP11Q9Y3A2 253 aaKnown RBP12.69□□□□□ -0.38
TRAPPC12-218ENST00000479897 A0A1W2PQ67 120 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 TRAFD1O14545 582 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 DNALI1O14645 258 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 PSMD3O43242 534 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 HTRA2O43464 458 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 FZD6O60353 706 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 GJB3O75712 270 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 SUN1O94901 812 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 SEC31AO94979 1220 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 HEXIM1O94992 359 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 EPOP01588 193 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 PRNPP04156 253 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 CTSLP07711 333 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 SERPINA4P29622 427 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 COPAP53621 1224 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 CDK16Q00536 496 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 ITKQ08881 620 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 KCNJ11Q14654 390 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 TRIP13Q15645 432 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 RNASEH2BQ5TBB1 312 aaKnown RBP12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 PKN3Q6P5Z2 889 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 MAMSTRQ6ZN01 415 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 PCGF5Q86SE9 256 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 HOOK3Q86VS8 718 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 CHST14Q8NCH0 376 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 OR2T3Q8NH03 318 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 SPATA22Q8NHS9 363 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 HCAR2Q8TDS4 363 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 CPT1BQ92523 772 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 ECHDC3Q96DC8 303 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 SNF8Q96H20 258 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 FEM1CQ96JP0 617 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 MRGPRX2Q96LB1 330 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 ZNF641Q96N77 438 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 TRIB3Q96RU7 358 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 RBM15Q96T37 977 aaKnown RBP eCLIP12.68□□□□□ -0.382e-7■■■■■ 39.2
TRAPPC12-218ENST00000479897 FAM129AQ9BZQ8 928 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 RSPH9Q9H1X1 276 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 MTG2Q9H4K7 406 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 ZDHHC6Q9H6R6 413 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 LRRC40Q9H9A6 602 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 ETNK1Q9HBU6 452 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 ZDHHC4Q9NPG8 344 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 DLGAP2Q9P1A6 1054 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 WHRNQ9P202 907 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 IL36AQ9UHA7 158 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 EVLQ9UI08 416 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 SHOC2Q9UQ13 582 aa12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 ARIH1Q9Y4X5 557 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC12-218ENST00000479897 PLXND1Q9Y4D7 1925 aa12.67□□□□□ -0.38
TRAPPC12-218ENST00000479897 SYNCRIPO60506 623 aaKnown RBP12.67□□□□□ -0.38
TRAPPC12-218ENST00000479897 PAPSS2O95340 614 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms