RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 A6NNZ2 444 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 J3KR12 359 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 CASC3O15234 703 aaKnown RBP17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 MMP20O60882 483 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 PIAS2O75928 621 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 GIMD1P0DJR0 217 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 PSMA2P25787 234 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 ETFBP38117 255 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 RHOAP61586 193 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 RPS21P63220 83 aaKnown RBP17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 DAB2P98082 770 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 FZD2Q14332 565 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 ASIC2Q16515 512 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 ZNF805Q5CZA5 627 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 NEK5Q6P3R8 708 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 ZNF571Q7Z3V5 609 aaPredicted RBP17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 ABI3BPQ7Z7G0 1075 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 VPS36Q86VN1 386 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 RBFAQ8N0V3 343 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 ARFGAP1Q8N6T3 406 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 KLF6Q99612 283 aaPredicted RBP17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 TCEAL2Q9H3H9 227 aaPredicted RBP17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 DHX35Q9H5Z1 703 aaKnown RBP17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 HAUS4Q9H6D7 363 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 RTN4Q9NQC3 1192 aaKnown RBP17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 KLHL11Q9NVR0 708 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 LHX3Q9UBR4 397 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 DAAM1Q9Y4D1 1078 aa17.64■□□□□ 0.41
ECHDC1-216ENST00000479525 URB1O60287 2271 aaKnown RBP17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 KNTC1P50748 2209 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 COL27A1Q8IZC6 1860 aaPredicted RBP17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 SCAMP1O15126 338 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 GSRP00390 522 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 CKMT2P17540 419 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 TPI1P60174 286 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 CCDC15Q0P6D6 951 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 OVGP1Q12889 678 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 PDE1CQ14123 709 aaPredicted RBP17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 CYTH1Q15438 398 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 KIAA1161Q6NSJ0 714 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 GDPD4Q6W3E5 623 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 ARHGAP36Q6ZRI8 547 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 TP53INP2Q8IXH6 220 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 ISG20Q96AZ6 181 aaKnown RBP17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 KCTD15Q96SI1 283 aaPredicted RBP17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 EPAS1Q99814 870 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 CNPY3Q9BT09 278 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 MYO1AQ9UBC5 1043 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 PNMA8BQ9ULN7 279 aaPredicted RBP17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 AP4E1Q9UPM8 1137 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 MFHAS1Q9Y4C4 1052 aa17.63■□□□□ 0.41
ECHDC1-216ENST00000479525 BPTFQ12830 3046 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 ANKRD62A6NC57 917 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 POP4O95707 220 aaKnown RBP17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 IGFALSP35858 605 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 RGRP47804 291 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 INSM1Q01101 510 aaPredicted RBP17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 SGCGQ13326 291 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 MAMLD1Q13495 774 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 SERINC3Q13530 473 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 C1orf61Q13536 156 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 CRTC1Q6UUV9 634 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 KYAT3Q6YP21 454 aaKnown RBP17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 TTC7BQ86TV6 843 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 TMPRSS12Q86WS5 348 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 LRIG1Q96JA1 1093 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 SNRNP25Q9BV90 132 aaKnown RBP17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 TTYH3Q9C0H2 523 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 MBNL1Q9NR56 388 aaKnown RBP17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 IPO11Q9UI26 975 aaKnown RBP17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 PCDHGA1Q9Y5H4 931 aa17.62■□□□□ 0.41
ECHDC1-216ENST00000479525 ASXL3Q9C0F0 2248 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 TTC24A2A3L6 582 aaPredicted RBP17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 AP1G1O43747 822 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 IGSF6O95976 241 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 TIMP2P16035 220 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 KIF26BQ2KJY2 2108 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 DEFB133Q30KQ1 61 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 PDCD7Q8N8D1 485 aaKnown RBP17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 OR4C6Q8NH72 309 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 APOLD1Q96LR9 279 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 GDAP1L1Q96MZ0 367 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 NCAPGQ9BPX3 1015 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 SLC39A8Q9C0K1 460 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 TMEM51Q9NW97 253 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 UBA2Q9UBT2 640 aaPredicted RBP17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 PCDHB1Q9Y5F3 818 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 AK5Q9Y6K8 562 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 RP1P56715 2156 aa17.61■□□□□ 0.41
ECHDC1-216ENST00000479525 LY6G6EA0A0G2JKS1 128 aa17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 EEF2KO00418 725 aaKnown RBP17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 DDX3XO00571 662 aaKnown RBP eCLIP17.6■□□□□ 0.417e-10■■■□□ 16
ECHDC1-216ENST00000479525 FPGTO14772 594 aa17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 TLX3O43711 291 aaPredicted RBP17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 TCF4P15884 667 aa17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 HNF1BP35680 557 aa17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 GEMIN4P57678 1058 aaKnown RBP17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 EIF2B5Q13144 721 aaKnown RBP17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 KLHL40Q2TBA0 621 aa17.6■□□□□ 0.41
ECHDC1-216ENST00000479525 PPP6R3Q5H9R7 873 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms