RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 HACD1B0YJ81 288 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 KCNK1O00180 336 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 KCNK3O14649 394 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 MUSKO15146 869 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 MTSS1O43312 755 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 SERPINA4P29622 427 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 IFI35P80217 286 aaPredicted RBP25.32■■□□□ 1.64
PERM1-203ENST00000479361 XRCC4Q13426 336 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 ERN2Q76MJ5 926 aaKnown RBP25.32■■□□□ 1.64
PERM1-203ENST00000479361 TMEFF1Q8IYR6 380 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 TTC13Q8NBP0 860 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 OR14C36Q8NHC7 312 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 LRRN4Q8WUT4 740 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 ARRDC3Q96B67 414 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 NUDCD1Q96RS6 583 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 HERPUD2Q9BSE4 406 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 POLR1EQ9GZS1 481 aaKnown RBP25.32■■□□□ 1.64
PERM1-203ENST00000479361 KDM4CQ9H3R0 1056 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 SCUBE2Q9NQ36 999 aa25.32■■□□□ 1.64
PERM1-203ENST00000479361 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.31■■□□□ 1.64
PERM1-203ENST00000479361 INSIG1O15503 277 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 CES1P23141 567 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 NEK3P51956 506 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 ADPRHP54922 357 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 ITKQ08881 620 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 PRKD1Q15139 912 aaPredicted RBP25.31■■□□□ 1.64
PERM1-203ENST00000479361 NOMO1Q15155 1222 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 ZNF569Q5MCW4 686 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 CFAP58Q5T655 872 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 AGBL4Q5VU57 503 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 FBXL19Q6PCT2 694 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 ZC3H18Q86VM9 953 aaKnown RBP25.31■■□□□ 1.64
PERM1-203ENST00000479361 PGBD5Q8N414 524 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 OR2T34Q8NGX1 318 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 HCAR2Q8TDS4 363 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 KLHL32Q96NJ5 620 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 PHOX2BQ99453 314 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 FERMT1Q9BQL6 677 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 TLR10Q9BXR5 811 aa25.31■■□□□ 1.64
PERM1-203ENST00000479361 PLK4O00444 970 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 JCHAINP01591 159 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 CR2P20023 1033 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 DHPSP49366 369 aaPredicted RBP25.3■■□□□ 1.64
PERM1-203ENST00000479361 MAXP61244 160 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 OTUD4Q01804 1114 aaKnown RBP25.3■■□□□ 1.64
PERM1-203ENST00000479361 BCL2L1Q07817 233 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 SYCP2LQ5T4T6 812 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 PIP5KL1Q5T9C9 394 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 ACTL9Q8TC94 416 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 ZNF419Q96HQ0 510 aaPredicted RBP25.3■■□□□ 1.64
PERM1-203ENST00000479361 IL12RB2Q99665 862 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 SUV39H2Q9H5I1 410 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 SEPT10Q9P0V9 454 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 DKK3Q9UBP4 350 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 GMEB2Q9UKD1 530 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 TTLL3Q9Y4R7 772 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 SHROOM3Q8TF72 1996 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 MYO15AQ9UKN7 3530 aa25.3■■□□□ 1.64
PERM1-203ENST00000479361 FAM47DPA6NHR8 397 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 C16orf96A6NNT2 1141 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 H7C0C1 242 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 RNF103O00237 685 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 PLRG1O43660 514 aaKnown RBP25.29■■□□□ 1.64
PERM1-203ENST00000479361 ZNF189O75820 626 aaPredicted RBP25.29■■□□□ 1.64
PERM1-203ENST00000479361 PIGNO95427 931 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 ADRB3P13945 408 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 ATP5OP48047 213 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 KLF1Q13351 362 aaPredicted RBP25.29■■□□□ 1.64
PERM1-203ENST00000479361 SLC45A4Q5BKX6 768 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 LYSMD4Q5XG99 296 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 ALG1LQ6GMV1 187 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 NCEH1Q6PIU2 408 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 PARS2Q7L3T8 475 aaKnown RBP25.29■■□□□ 1.64
PERM1-203ENST00000479361 RAB7BQ96AH8 199 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 VOPP1Q96AW1 172 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 HSPA12BQ96MM6 686 aa25.29■■□□□ 1.64
PERM1-203ENST00000479361 QKIQ96PU8 341 aaKnown RBP eCLIP25.29■■□□□ 1.64
PERM1-203ENST00000479361 TPX2Q9ULW0 747 aaKnown RBP25.29■■□□□ 1.64
PERM1-203ENST00000479361 USP27XA6NNY8 438 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 RETP07949 1114 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 DPP6P42658 865 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 EIF3EP60228 445 aaKnown RBP25.28■■□□□ 1.64
PERM1-203ENST00000479361 BRAT1Q6PJG6 821 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 CAMK1DQ8IU85 385 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 CDKL3Q8IVW4 592 aaPredicted RBP25.28■■□□□ 1.64
PERM1-203ENST00000479361 DEFB119Q8N690 84 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 PAF1Q8N7H5 531 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 SEMA3CQ99985 751 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 NOD2Q9HC29 1040 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 PREBQ9HCU5 417 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 NCDNQ9UBB6 729 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 ATP8A1Q9Y2Q0 1164 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 PCDHGA5Q9Y5G8 931 aa25.28■■□□□ 1.64
PERM1-203ENST00000479361 TBC1D3DA0A087WVF3 549 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 TBC1D3IA0A087WXS9 549 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 TBC1D3EA0A087X179 549 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 TBC1D3KA0A087X1G2 549 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 TBC1D3FA6NER0 549 aaPredicted RBP25.27■■□□□ 1.64
PERM1-203ENST00000479361 PRR23AA6NEV1 266 aa25.27■■□□□ 1.64
PERM1-203ENST00000479361 METTL12A8MUP2 240 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms