RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 CRTC1Q6UUV9 634 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 ARCQ7LC44 396 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 NLRP14Q86W24 1093 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 LMX1AQ8TE12 382 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 MED8Q96G25 268 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 SPON2Q9BUD6 331 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.99□□□□□ -0.33
TDP2-204ENST00000478507 LRRC61Q9BV99 259 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 TM6SF2Q9BZW4 377 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 ZYG11BQ9C0D3 744 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 CLPBQ9H078 707 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 ZDHHC6Q9H6R6 413 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 NDFIP2Q9NV92 336 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 HECAQ9UBI9 543 aaPredicted RBP12.99□□□□□ -0.33
TDP2-204ENST00000478507 LRRK1Q38SD2 2015 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 SCN8AQ9UQD0 1980 aa12.99□□□□□ -0.33
TDP2-204ENST00000478507 TLN1Q9Y490 2541 aaKnown RBP12.99□□□□□ -0.33
TDP2-204ENST00000478507 NTN3O00634 580 aaPredicted RBP12.98□□□□□ -0.33
TDP2-204ENST00000478507 EFSO43281 561 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 SRGAP2O75044 1071 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 CYP11B1P15538 503 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 RBMS1P29558 406 aaKnown RBP12.98□□□□□ -0.33
TDP2-204ENST00000478507 ACVRL1P37023 503 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 DNA2P51530 1060 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 NRG1Q02297 640 aaPredicted RBP12.98□□□□□ -0.33
TDP2-204ENST00000478507 SGCGQ13326 291 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 PRRT3Q5FWE3 981 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 FAM102AQ5T9C2 384 aaPredicted RBP12.98□□□□□ -0.33
TDP2-204ENST00000478507 FAM131BQ86XD5 332 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 PHACTR4Q8IZ21 702 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 TMEM35BQ8NCS4 154 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 OR6K2Q8NGY2 324 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 BTN2A2Q8WVV5 523 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 ARHGEF2Q92974 986 aaKnown RBP12.98□□□□□ -0.33
TDP2-204ENST00000478507 NAT6Q93015 286 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 C18orf8Q96DM3 657 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 CCDC97Q96F63 343 aaPredicted RBP12.98□□□□□ -0.33
TDP2-204ENST00000478507 CFAP57Q96MR6 1250 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 IL12RB2Q99665 862 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 SPASTQ9UBP0 616 aa12.98□□□□□ -0.33
TDP2-204ENST00000478507 APOBEC3BQ9UH17 382 aaKnown RBP12.98□□□□□ -0.33
TDP2-204ENST00000478507 COL12A1Q99715 3063 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 PTPN13Q12923 2485 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 MUSKO15146 869 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 YY2O15391 372 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 GSRP00390 522 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 ITGA2BP08514 1039 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 BPIFB4P59827 614 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 YPEL5P62699 121 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 ARL13BQ3SXY8 428 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 RAB6CQ53S08 254 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 C2CD6Q53TS8 623 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 KIAA1614Q5VZ46 1190 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 DRC7Q8IY82 874 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 ARL14Q8N4G2 192 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 OR2AP1Q8NGE2 309 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 WDR36Q8NI36 951 aaKnown RBP12.97□□□□□ -0.33
TDP2-204ENST00000478507 WDR48Q8TAF3 677 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 LIN37Q96GY3 246 aaPredicted RBP12.97□□□□□ -0.33
TDP2-204ENST00000478507 RAB6CQ9H0N0 254 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 IPO11Q9UI26 975 aaKnown RBP12.97□□□□□ -0.33
TDP2-204ENST00000478507 UNC13CQ8NB66 2214 aa12.97□□□□□ -0.33
TDP2-204ENST00000478507 CCDC187A0A096LP49 1063 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 GADD45BO75293 160 aaPredicted RBP12.96□□□□□ -0.33
TDP2-204ENST00000478507 TNFSF15O95150 251 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 LSM8O95777 96 aaKnown RBP12.96□□□□□ -0.33
TDP2-204ENST00000478507 CELA2BP08218 269 aaPredicted RBP12.96□□□□□ -0.33
TDP2-204ENST00000478507 TSHRP16473 764 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 ETFBP38117 255 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 MAPKAPK2P49137 400 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 RPIAP49247 311 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 ADKP55263 362 aaKnown RBP12.96□□□□□ -0.33
TDP2-204ENST00000478507 C1orf61Q13536 156 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 PTK2BQ14289 1009 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 MIIPQ5JXC2 388 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 MACC1Q6ZN28 852 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 B3GNT8Q7Z7M8 397 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 TP53I13Q8NBR0 393 aaPredicted RBP12.96□□□□□ -0.33
TDP2-204ENST00000478507 ARHGEF26Q96DR7 871 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 CCDC3Q9BQI4 270 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 NAA15Q9BXJ9 866 aaKnown RBP12.96□□□□□ -0.33
TDP2-204ENST00000478507 OSBPL1AQ9BXW6 950 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 RETREG1Q9H6L5 497 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 MBNL1Q9NR56 388 aaKnown RBP12.96□□□□□ -0.33
TDP2-204ENST00000478507 TMEM248Q9NWD8 314 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 ACSL6Q9UKU0 697 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 ATXN7L1Q9ULK2 861 aaPredicted RBP12.96□□□□□ -0.33
TDP2-204ENST00000478507 PADI4Q9UM07 663 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 PCDHGA7Q9Y5G6 932 aa12.96□□□□□ -0.33
TDP2-204ENST00000478507 UBR5O95071 2799 aaPredicted RBP12.95□□□□□ -0.34
TDP2-204ENST00000478507 FAM170AA1A519 330 aa12.95□□□□□ -0.34
TDP2-204ENST00000478507 FAM72CH0Y354 149 aa12.95□□□□□ -0.34
TDP2-204ENST00000478507 PYCARD-AS1I3L0S3 204 aa12.95□□□□□ -0.34
TDP2-204ENST00000478507 KRIT1O00522 736 aa12.95□□□□□ -0.34
TDP2-204ENST00000478507 TOR1BO14657 336 aa12.95□□□□□ -0.34
TDP2-204ENST00000478507 NOBOXO60393 691 aa12.95□□□□□ -0.34
TDP2-204ENST00000478507 POP4O95707 220 aaKnown RBP12.95□□□□□ -0.34
TDP2-204ENST00000478507 UGT2B4P06133 528 aa12.95□□□□□ -0.34
TDP2-204ENST00000478507 RHOQP17081 205 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms