RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 M0R296 226 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 ATG13O75143 517 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 SLU7O95391 586 aaKnown RBP16.38■□□□□ 0.21
VHL-203ENST00000477538 METTL18O95568 372 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 MMP2P08253 660 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 SERPINF2P08697 491 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 GKP32189 559 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 FDFT1P37268 417 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 RPS9P46781 194 aaKnown RBP16.38■□□□□ 0.21
VHL-203ENST00000477538 PRPSAP1Q14558 356 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 ELAVL3Q14576 367 aaKnown RBP16.38■□□□□ 0.21
VHL-203ENST00000477538 NUMA1Q14980 2115 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 FAXCQ5TGI0 409 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 KIAA1211LQ6NV74 962 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 NCEH1Q6PIU2 408 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 SPATA22Q8NHS9 363 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 GRIN3AQ8TCU5 1115 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 PPP1R2P1Q96PQ5 205 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 TUBGCP5Q96RT8 1024 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 GORASP1Q9BQQ3 440 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 LRRC1Q9BTT6 524 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 CPEB1Q9BZB8 566 aaKnown RBP16.38■□□□□ 0.21
VHL-203ENST00000477538 CHRDQ9H2X0 955 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 RAB6BQ9NRW1 208 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 IL36AQ9UHA7 158 aa16.38■□□□□ 0.21
VHL-203ENST00000477538 KMT2EQ8IZD2 1858 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 SCN8AQ9UQD0 1980 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.37■□□□□ 0.21
VHL-203ENST00000477538 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.37■□□□□ 0.21
VHL-203ENST00000477538 ALOX15BO15296 676 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 ANXA9O76027 345 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 MT-CYBP00156 380 aaPredicted RBP16.37■□□□□ 0.21
VHL-203ENST00000477538 DCNP07585 359 aaKnown RBP16.37■□□□□ 0.21
VHL-203ENST00000477538 COL9A1P20849 921 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 GEMP55040 296 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 BASP1P80723 227 aaKnown RBP16.37■□□□□ 0.21
VHL-203ENST00000477538 SKOR1P84550 965 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 GAS6Q14393 721 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 IHHQ14623 411 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 GRM3Q14832 879 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 SLC14A2Q15849 920 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 DSG4Q86SJ6 1040 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 PRPF39Q86UA1 669 aaKnown RBP16.37■□□□□ 0.21
VHL-203ENST00000477538 OXNAD1Q96HP4 312 aaPredicted RBP16.37■□□□□ 0.21
VHL-203ENST00000477538 NSMCE3Q96MG7 304 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 FAM129BQ96TA1 746 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 MLPHQ9BV36 600 aaPredicted RBP16.37■□□□□ 0.21
VHL-203ENST00000477538 ATP13A3Q9H7F0 1226 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 FBRSQ9HAH7 460 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 ETNK1Q9HBU6 452 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 UBP1Q9NZI7 540 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 FAM153AQ9UHL3 310 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 AAR2Q9Y312 384 aaKnown RBP16.37■□□□□ 0.21
VHL-203ENST00000477538 WASF2Q9Y6W5 498 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 ZDBF2Q9HCK1 2354 aa16.37■□□□□ 0.21
VHL-203ENST00000477538 TRPM6Q9BX84 2022 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 A0A1W2PQF6 199 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 GOLGA6CA6NDK9 693 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 GOLGA6BA6NDN3 693 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 EFCAB8A8MWE9 144 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 RIOK3O14730 519 aaKnown RBP16.36■□□□□ 0.21
VHL-203ENST00000477538 PMPCBO75439 489 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 LEFTY1O75610 366 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 PIGNO95427 931 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 PRNPP04156 253 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 CTSLP07711 333 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 GOLGA6DP0CG33 693 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 SERPINA4P29622 427 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 ADCY8P40145 1251 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 BCL2L1Q07817 233 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 MPP3Q13368 585 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 SEMA5AQ13591 1074 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 CRY1Q16526 586 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 GLE1Q53GS7 698 aaKnown RBP16.36■□□□□ 0.21
VHL-203ENST00000477538 TEX35Q5T0J7 233 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 CCDC70Q6NSX1 233 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 TMEM92Q6UXU6 159 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 SYT13Q7L8C5 426 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 CAMK1DQ8IU85 385 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 OR2T3Q8NH03 318 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 TADA1Q96BN2 335 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 LRRC45Q96CN5 670 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 LRIG1Q96JA1 1093 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 TRIM31Q9BZY9 425 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 RAB17Q9H0T7 212 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 CD248Q9HCU0 757 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 VPS45Q9NRW7 570 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 POLR3BQ9NW08 1133 aaPredicted RBP16.36■□□□□ 0.21
VHL-203ENST00000477538 GOLGA6AQ9NYA3 693 aa16.36■□□□□ 0.21
VHL-203ENST00000477538 UTP11Q9Y3A2 253 aaKnown RBP16.36■□□□□ 0.21
VHL-203ENST00000477538 E7EVH7 732 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 PSMD3O43242 534 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 RNASEH1O60930 286 aaKnown RBP16.35■□□□□ 0.21
VHL-203ENST00000477538 SOCS5O75159 536 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 HEXIM1O94992 359 aaKnown RBP16.35■□□□□ 0.21
VHL-203ENST00000477538 UGT2B4P06133 528 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 AOC1P19801 751 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 CA4P22748 312 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 MAGEA9P43362 315 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 COPAP53621 1224 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms