RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 ARTNQ5T4W7 220 aa13.55□□□□□ -0.24
HDAC7-221ENST00000477203 C1QTNF12Q5T7M4 302 aa13.55□□□□□ -0.24
HDAC7-221ENST00000477203 RPS27LQ71UM5 84 aaKnown RBP13.55□□□□□ -0.24
HDAC7-221ENST00000477203 LRRC43Q8N309 656 aa13.55□□□□□ -0.24
HDAC7-221ENST00000477203 SPPL2BQ8TCT7 592 aa13.55□□□□□ -0.24
HDAC7-221ENST00000477203 IL12RB2Q99665 862 aa13.55□□□□□ -0.24
HDAC7-221ENST00000477203 CPNE1Q99829 537 aa13.55□□□□□ -0.24
HDAC7-221ENST00000477203 NAT9Q9BTE0 207 aa13.55□□□□□ -0.24
HDAC7-221ENST00000477203 TSR3Q9UJK0 312 aaKnown RBP13.55□□□□□ -0.24
HDAC7-221ENST00000477203 PRUNE2Q8WUY3 3088 aa13.55□□□□□ -0.24
HDAC7-221ENST00000477203 REV3LO60673 3130 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 ZBBXA8MT70 800 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 PLIN3O60664 434 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 ANXA9O76027 345 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 HAUS5O94927 633 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 ENO1P06733 434 aaKnown RBP13.54□□□□□ -0.24
HDAC7-221ENST00000477203 PRSS56P0CW18 603 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 TACR2P21452 398 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 ARRB2P32121 409 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 MAGEA10P43363 369 aaPredicted RBP13.54□□□□□ -0.24
HDAC7-221ENST00000477203 KDSRQ06136 332 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 USP41Q3LFD5 358 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 SLC39A5Q6ZMH5 540 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 PAF1Q8N7H5 531 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 PPHLN1Q8NEY8 458 aaKnown RBP13.54□□□□□ -0.24
HDAC7-221ENST00000477203 UCMAQ8WVF2 138 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 VAT1Q99536 393 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 CLSTN3Q9BQT9 956 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 SOX13Q9UN79 622 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 ZNF232Q9UNY5 417 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 CRYL1Q9Y2S2 319 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 CFAP73A6NFT4 308 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 F5H5T6 163 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 INPPL1O15357 1258 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 GSTA2P09210 222 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 DLDP09622 509 aaKnown RBP13.54□□□□□ -0.24
HDAC7-221ENST00000477203 BMP1P13497 986 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 ATP5C1P36542 298 aaKnown RBP13.54□□□□□ -0.24
HDAC7-221ENST00000477203 BTG3Q14201 252 aaPredicted RBP13.54□□□□□ -0.24
HDAC7-221ENST00000477203 ZNF235Q14590 738 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 TRIP4Q15650 581 aaPredicted RBP13.54□□□□□ -0.24
HDAC7-221ENST00000477203 GALNTL6Q49A17 601 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 CLNKQ7Z7G1 428 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 CRLF3Q8IUI8 442 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 DPF3Q92784 378 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 EXT2Q93063 718 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 TMEM169Q96HH4 297 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 ELMO2Q96JJ3 720 aa13.54□□□□□ -0.24
HDAC7-221ENST00000477203 NEMP1O14524 444 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 COCHO43405 550 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 KLKB1P03952 638 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 SLC2A3P11169 496 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 SLC1A2P43004 574 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 NPY2RP49146 381 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 PLK1P53350 603 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 GEMP55040 296 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 RIPK1Q13546 671 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 UBAP2LQ14157 1087 aaKnown RBP13.53□□□□□ -0.24
HDAC7-221ENST00000477203 IKBKEQ14164 716 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 RBM20Q5T481 1227 aaKnown RBP13.53□□□□□ -0.24
HDAC7-221ENST00000477203 PKN3Q6P5Z2 889 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 CNSTQ6PJW8 725 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 ZNF784Q8NCA9 323 aaPredicted RBP13.53□□□□□ -0.24
HDAC7-221ENST00000477203 PHC3Q8NDX5 983 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 OR6K2Q8NGY2 324 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 FCRL5Q96RD9 977 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 TLK1Q9UKI8 766 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 GOLGA8QA0A0J9YX86 632 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 GOLGA8OA6NCC3 632 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 GOLGA8NF8WBI6 632 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 BNIP3LO60238 219 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 ATP6V1G1O75348 118 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 DCTN3O75935 186 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 T-ENOLP0DO92 83 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 SLC1A6P48664 564 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 PCLAFQ15004 111 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 RGS9BPQ6ZS82 235 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 CEP97Q8IW35 865 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 RYBPQ8N488 228 aaPredicted RBP13.53□□□□□ -0.24
HDAC7-221ENST00000477203 LZTR1Q8N653 840 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 IGSF21Q96ID5 467 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 CYP4F12Q9HCS2 524 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 RUVBL2Q9Y230 463 aaKnown RBP13.53□□□□□ -0.24
HDAC7-221ENST00000477203 ARL5AQ9Y689 179 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 NEMP2A6NFY4 417 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 FCHO1O14526 889 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 COQ9O75208 318 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 GLRA3O75311 464 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 UNC5CO95185 931 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 GSRP00390 522 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 RHOQP17081 205 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 CORO1AP31146 461 aaKnown RBP13.53□□□□□ -0.24
HDAC7-221ENST00000477203 CCNFP41002 786 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 RENBPP51606 427 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 ARSDP51689 593 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 LIMK2P53671 638 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 ARHGEF6Q15052 776 aa13.53□□□□□ -0.24
HDAC7-221ENST00000477203 HSF5Q4G112 596 aaPredicted RBP13.53□□□□□ -0.24
HDAC7-221ENST00000477203 FNDC1Q4ZHG4 1894 aaPredicted RBP13.53□□□□□ -0.24
HDAC7-221ENST00000477203 GRTP1Q5TC63 336 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms