RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 BPIFB4P59827 614 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 RPS24P62847 133 aaKnown RBP7.45□□□□□ -1.22
BRCA1-214ENST00000477152 PAK1Q13153 545 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 PPP2R5EQ16537 467 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 RAP1GAP2Q684P5 730 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 KLHL10Q6JEL2 608 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 DHRS13Q6UX07 377 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 LRRC31Q6UY01 552 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-214ENST00000477152 RRAGAQ7L523 313 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 DCP2Q8IU60 420 aaKnown RBP7.45□□□□□ -1.22
BRCA1-214ENST00000477152 ZDHHC17Q8IUH5 632 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 LSMEM2Q8N112 164 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 CFAP52Q8N1V2 620 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 STK40Q8N2I9 435 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 LSM14AQ8ND56 463 aaKnown RBP7.45□□□□□ -1.22
BRCA1-214ENST00000477152 SPATA20Q8TB22 786 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 NELFBQ8WX92 580 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 LRIG1Q96JA1 1093 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 OSBPL2Q9H1P3 480 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 UBE2TQ9NPD8 197 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-214ENST00000477152 STAP1Q9ULZ2 295 aa7.45□□□□□ -1.22
BRCA1-214ENST00000477152 TRIM49BA6NDI0 452 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 NEMP2A6NFY4 417 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 TTC34A8MYJ7 566 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 GNB5O14775 395 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 ATE1O95260 518 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 F9P00740 461 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 CKMT2P17540 419 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 EPHA8P29322 1005 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 NTF4P34130 210 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 KRT9P35527 623 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 USP8P40818 1118 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 SGSHP51688 502 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 ADPRHP54922 357 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 NXPH1P58417 271 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 IL9RQ01113 521 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 BROXQ5VW32 411 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 NADSYN1Q6IA69 706 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 TMEM110Q86TL2 294 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 TAC4Q86UU9 113 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 TRIM69Q86WT6 500 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 CCAR2Q8N163 923 aaKnown RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 EID2Q8N6I1 236 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 SAP25Q8TEE9 199 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 ZNF606Q8WXB4 792 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 P2RY11Q96G91 374 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 LMLNQ96KR4 655 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 MRGPRX3Q96LB0 322 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 PRICKLE1Q96MT3 831 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 RPRD1AQ96P16 312 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 INTS2Q9H0H0 1204 aaKnown RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 PDCL3Q9H2J4 239 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 USP29Q9HBJ7 922 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 DDIT4Q9NX09 232 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 NCKIPSDQ9NZQ3 722 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 KLHL3Q9UH77 587 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 VPS28Q9UK41 221 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 AP4E1Q9UPM8 1137 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 CNTN6Q9UQ52 1028 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 BTBD3Q9Y2F9 522 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 ZDHHC9Q9Y397 364 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 KCNK3O14649 394 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 LATO43561 262 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 PLRG1O43660 514 aaKnown RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 PRNPP04156 253 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 PDGFRAP16234 1089 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 AKT2P31751 481 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 CDH4P55283 916 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 NUMA1Q14980 2115 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 TPD52L1Q16890 204 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 BRMS1LQ5PSV4 323 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 GBP6Q6ZN66 633 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 C11orf57Q6ZUT1 292 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 CREBRFQ8IUR6 639 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 FAM114A1Q8IWE2 563 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 C1orf131Q8NDD1 294 aaKnown RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 WFDC5Q8TCV5 224 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 CLEC4CQ8WTT0 213 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 PTPRN2Q92932 1015 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 PPP1R13BQ96KQ4 1090 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 RPL10LQ96L21 214 aaKnown RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 DPH2Q9BQC3 489 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 DUSP23Q9BVJ7 150 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 CYTH4Q9UIA0 394 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 INTS6Q9UL03 887 aaKnown RBP7.44□□□□□ -1.22
BRCA1-214ENST00000477152 CTNND2Q9UQB3 1225 aa7.44□□□□□ -1.22
BRCA1-214ENST00000477152 CHD6Q8TD26 2715 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 A0A1W2PR77 199 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 E5RJQ4 531 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 RNF225M0QZC1 329 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-214ENST00000477152 MCF2LO15068 1137 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 PMS1P54277 932 aaKnown RBP7.43□□□□□ -1.22
BRCA1-214ENST00000477152 UCNP55089 124 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 ETF1P62495 437 aaKnown RBP7.43□□□□□ -1.22
BRCA1-214ENST00000477152 ID3Q02535 119 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 SERINC3Q13530 473 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 FSCBQ5H9T9 825 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 OR6B2Q6IFH4 312 aa7.43□□□□□ -1.22
BRCA1-214ENST00000477152 TTI2Q6NXR4 508 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms