RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 RYBPQ8N488 228 aaPredicted RBP10.06□□□□□ -0.8
PTPN7-208ENST00000476061 SNIP1Q8TAD8 396 aaKnown RBP10.06□□□□□ -0.8
PTPN7-208ENST00000476061 BTN2A2Q8WVV5 523 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 VCPIP1Q96JH7 1222 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 APOLD1Q96LR9 279 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 TBATAQ96M53 351 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 GDAP1L1Q96MZ0 367 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 AGPAT1Q99943 283 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 CPEB1Q9BZB8 566 aaKnown RBP10.06□□□□□ -0.8
PTPN7-208ENST00000476061 TTYH3Q9C0H2 523 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 CATSPERBQ9H7T0 1116 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 DONSONQ9NYP3 566 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 NCKIPSDQ9NZQ3 722 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 DKK3Q9UBP4 350 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 SALL4Q9UJQ4 1053 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 ACTL7AQ9Y615 435 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 AK5Q9Y6K8 562 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 SHROOM3Q8TF72 1996 aa10.06□□□□□ -0.8
PTPN7-208ENST00000476061 LRP4O75096 1905 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 FAM170AA1A519 330 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 IGLON5A6NGN9 336 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 EIF3CLB5ME19 914 aaKnown RBP10.05□□□□□ -0.8
PTPN7-208ENST00000476061 K7ESM1 405 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 KRIT1O00522 736 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 RAD51BO15315 384 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 FGF10O15520 208 aaPredicted RBP10.05□□□□□ -0.8
PTPN7-208ENST00000476061 CCP110O43303 1012 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 BUB1O43683 1085 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 GJB6O95452 261 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 IGSF6O95976 241 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 MT-CO3P00414 261 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 FERP16591 822 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 DESP17661 470 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 EPHB2P29323 1055 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 ACTN2P35609 894 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 ABCG1P45844 678 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 CLDN6P56747 220 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 UBXN1Q04323 297 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 GRM3Q14832 879 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 STX1AQ16623 288 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 SKOR2Q2VWA4 1001 aaPredicted RBP10.05□□□□□ -0.8
PTPN7-208ENST00000476061 SOWAHCQ53LP3 525 aaPredicted RBP10.05□□□□□ -0.8
PTPN7-208ENST00000476061 ACAD10Q6JQN1 1059 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 DNAJC24Q6P3W2 148 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 GDPD4Q6W3E5 623 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 LRRC69Q6ZNQ3 347 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 APTXQ7Z2E3 356 aaKnown RBP10.05□□□□□ -0.8
PTPN7-208ENST00000476061 PTAR1Q7Z6K3 402 aaPredicted RBP10.05□□□□□ -0.8
PTPN7-208ENST00000476061 PHLDB2Q86SQ0 1253 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 LSMEM2Q8N112 164 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 UMODL1-AS1Q8N2C9 162 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 BAP1Q92560 729 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 FGF11Q92914 225 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 CENPTQ96BT3 561 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 GRAMD1AQ96CP6 724 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 PCMTD1Q96MG8 357 aaPredicted RBP10.05□□□□□ -0.8
PTPN7-208ENST00000476061 KLHL32Q96NJ5 620 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 EIF3CQ99613 913 aaKnown RBP10.05□□□□□ -0.8
PTPN7-208ENST00000476061 EPAS1Q99814 870 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 CNPY3Q9BT09 278 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 C1QTNF7Q9BXJ2 289 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 MAGEB5Q9BZ81 275 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 NOL6Q9H6R4 1146 aaKnown RBP10.05□□□□□ -0.8
PTPN7-208ENST00000476061 DNAJC28Q9NX36 388 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 IPO11Q9UI26 975 aaKnown RBP10.05□□□□□ -0.8
PTPN7-208ENST00000476061 FZD10Q9ULW2 581 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 MYO6Q9UM54 1294 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 CHD6Q8TD26 2715 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 PKD1L2Q7Z442 2459 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 KNTC1P50748 2209 aa10.05□□□□□ -0.8
PTPN7-208ENST00000476061 URB1O60287 2271 aaKnown RBP10.04□□□□□ -0.8
PTPN7-208ENST00000476061 LY6G6EA0A0G2JKS1 128 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 NEMP1O14524 444 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 FFAR2O15552 330 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 RRP8O43159 456 aaKnown RBP10.04□□□□□ -0.8
PTPN7-208ENST00000476061 SPINT1O43278 529 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 AQP9O43315 295 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 TLX3O43711 291 aaPredicted RBP10.04□□□□□ -0.8
PTPN7-208ENST00000476061 OPA1O60313 960 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 TM7SF2O76062 418 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 TMCC1O94876 653 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 UGT2B4P06133 528 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 CDK11BP21127 795 aaKnown RBP10.04□□□□□ -0.8
PTPN7-208ENST00000476061 GKP32189 559 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 RPL7AP62424 266 aaKnown RBP10.04□□□□□ -0.8
PTPN7-208ENST00000476061 ELP6Q0PNE2 266 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 SERINC3Q13530 473 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 COL9A2Q14055 689 aaPredicted RBP10.04□□□□□ -0.8
PTPN7-208ENST00000476061 PDE1CQ14123 709 aaPredicted RBP10.04□□□□□ -0.8
PTPN7-208ENST00000476061 NCAPHQ15003 741 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 ACAP1Q15027 740 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 TMEM52BQ4KMG9 183 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 SCYL2Q6P3W7 929 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 TTC7BQ86TV6 843 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 MCOLN2Q8IZK6 566 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 PYROXD2Q8N2H3 581 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 ZNF548Q8NEK5 533 aaPredicted RBP10.04□□□□□ -0.8
PTPN7-208ENST00000476061 OR6K2Q8NGY2 324 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 DEPDC7Q96QD5 511 aa10.04□□□□□ -0.8
PTPN7-208ENST00000476061 HSD3B7Q9H2F3 369 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms