RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 STRCQ7RTU9 1775 aa10.68□□□□□ -0.7
ABCF1-205ENST00000475993 COL14A1Q05707 1796 aaKnown RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 KPNA7A9QM74 516 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 PIK3R2O00459 728 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 ARHGEF15O94989 841 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 CLIC3O95833 236 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 MBL2P11226 248 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 ITGB5P18084 799 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 TFEBP19484 476 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 EPHX2P34913 555 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 GRIA1P42261 906 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 NPTX1Q15818 432 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 PTPN20Q4JDL3 420 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 LDLRAP1Q5SW96 308 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 PXDC1Q5TGL8 231 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 GTF2IRD2BQ6EKJ0 949 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 DSG4Q86SJ6 1040 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 GTF2IRD2Q86UP8 949 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 TMEM151BQ8IW70 566 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 PLD6Q8N2A8 252 aaKnown RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 PQLC3Q8N755 202 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 PLD5Q8N7P1 536 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 TTLL6Q8N841 843 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 SLC4A11Q8NBS3 891 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 APPL2Q8NEU8 664 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 SNX19Q92543 992 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 FBXL20Q96IG2 436 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 CDK5RAP1Q96SZ6 601 aaKnown RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 RMDN3Q96TC7 470 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 APBA2Q99767 749 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 VPS33BQ9H267 617 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 THG1LQ9NWX6 298 aaKnown RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 KLQ9UEF7 1012 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 PRR12Q9ULL5 1215 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 CDYLQ9Y232 598 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 METTL18O95568 372 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 LEPRP48357 1165 aaKnown RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 MPP1Q00013 466 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 DNASE1L3Q13609 305 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 UGCGQ16739 394 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 CCBE1Q6UXH8 406 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 ILDR2Q71H61 639 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 ANKRD13AQ8IZ07 590 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 EMC1Q8N766 993 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 FAM110BQ8TC76 370 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 CANT1Q8WVQ1 401 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 RMDN1Q96DB5 314 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 OMA1Q96E52 524 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 MARK4Q96L34 752 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 PEBP4Q96S96 227 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 CCSER2Q9H7U1 834 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 MOV10Q9HCE1 1003 aaKnown RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 SNX15Q9NRS6 342 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 PKD2L1Q9P0L9 805 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 TJP2Q9UDY2 1190 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 SFMBT1Q9UHJ3 866 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 ZNF541Q9H0D2 1346 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 COL5A3P25940 1745 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 WDR27A2RRH5 827 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 KCNU1A8MYU2 1149 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 B8ZZF3 427 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 KRT6AP02538 564 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 LTFP02788 710 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 KRT6BP04259 564 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 CDH6P55285 790 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 COPZ1P61923 177 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 ATAD3BQ5T9A4 648 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 NEK5Q6P3R8 708 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 ZNF773Q6PK81 442 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 PLEKHG7Q6ZR37 379 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 CHST15Q7LFX5 561 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 CMC1Q7Z7K0 106 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 C4orf19Q8IY42 314 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 PARP8Q8N3A8 854 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 LILRB2Q8N423 598 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 HERVK_113Q902F9 699 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 HDAC2Q92769 488 aaKnown RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 RNF157Q96PX1 679 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 ZNF717Q9BY31 904 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 TRIM39Q9HCM9 518 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 SPAG4Q9NPE6 437 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 KCNH7Q9NS40 1196 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 CCM2LQ9NUG4 571 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-205ENST00000475993 SNTG2Q9NY99 539 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 VTI1BQ9UEU0 232 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 POLHQ9Y253 713 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 CFL2Q9Y281 166 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 RAD54BQ9Y620 910 aa10.67□□□□□ -0.7
ABCF1-205ENST00000475993 E2F8A0AVK6 867 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 SCO2O43819 266 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 PTPN9P43378 593 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 LIG4P49917 911 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 OCA2Q04671 838 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 MAPRE1Q15691 268 aaKnown RBP10.66□□□□□ -0.7
ABCF1-205ENST00000475993 ATP6AP1Q15904 470 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 NXNQ6DKJ4 435 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 ZCCHC8Q6NZY4 707 aaKnown RBP10.66□□□□□ -0.7
ABCF1-205ENST00000475993 LINC00299Q6ZSB3 139 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 TAS1R3Q7RTX0 852 aa10.66□□□□□ -0.7
ABCF1-205ENST00000475993 DGLUCYQ7Z3D6 616 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms