RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 DPP3Q9NY33 737 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 UTP6Q9NYH9 597 aaKnown RBP6.97□□□□□ -1.29
UBR4-212ENST00000475973 HSFX1Q9UBD0 423 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TMCO1Q9UM00 188 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 ARHGAP26Q9UNA1 814 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 AP4E1Q9UPM8 1137 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 RAP2CQ9Y3L5 183 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 TRPV2Q9Y5S1 764 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 CDY2AQ9Y6F7 541 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 CDY1Q9Y6F8 540 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 SQORQ9Y6N5 450 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 UNC80Q8N2C7 3258 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 A0A0C4DFX4 3053 aa6.97□□□□□ -1.29
UBR4-212ENST00000475973 COL4A6Q14031 1691 aa6.96□□□□□ -1.29
UBR4-212ENST00000475973 EYSQ5T1H1 3165 aa6.96□□□□□ -1.29
UBR4-212ENST00000475973 SMIM35A0A1B0GVV1 85 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 SLCO1B7G3V0H7 640 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 XPO1O14980 1071 aaKnown RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 TRIM13O60858 407 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 LILRA1O75019 489 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 DAB1O75553 588 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 BCAS2O75934 225 aaPredicted RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 CHRNA1P02708 482 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 APOA4P06727 396 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 C8BP07358 591 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 THRAP10827 490 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 ZNF26P17031 533 aaPredicted RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 MX2P20592 715 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 CTNNB1P35222 781 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 SPRP35270 261 aaPredicted RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 SERPINB5P36952 375 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 PEX19P40855 299 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 MATKP42679 507 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 NPY2RP49146 381 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 SERPINB8P50452 374 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 CHN2P52757 468 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 SESN3P58005 492 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 DNAJB13P59910 316 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 TXNL4AP83876 142 aaKnown RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 TFF2Q03403 129 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 GALNT1Q10472 559 aaPredicted RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 BST2Q10589 180 aaKnown RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 DLG1Q12959 904 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 ORC1Q13415 861 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 MTM1Q13496 603 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 MED21Q13503 144 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 CUL3Q13618 768 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 LPIN1Q14693 890 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 PDK1Q15118 436 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 PDK3Q15120 406 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 TLR1Q15399 786 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 PDCD2Q16342 344 aaPredicted RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 DCAF4L1Q3SXM0 396 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 FSCBQ5H9T9 825 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 FBXO47Q5MNV8 452 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 MARCH8Q5T0T0 291 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 HEATR6Q6AI08 1181 aaKnown RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 DPH6Q7L8W6 267 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 ZNF410Q86VK4 478 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 RASSF3Q86WH2 238 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 CCDC116Q8IYX3 515 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 ST13P4Q8IZP2 240 aaPredicted RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 PGAM4Q8N0Y7 254 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 ZNF567Q8N184 647 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 SCML4Q8N228 414 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 PLD6Q8N2A8 252 aaKnown RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 PELI3Q8N2H9 469 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 DCLK2Q8N568 766 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 CCDC185Q8N715 623 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 COLGALT1Q8NBJ5 622 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 ADAMTS16Q8TE57 1224 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 STYXQ8WUJ0 223 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 DEPDC1BQ8WUY9 529 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 ATP2A3Q93084 1043 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 MRPL38Q96DV4 380 aaKnown RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 SNX27Q96L92 541 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 ZMAT2Q96NC0 199 aaKnown RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 LENG8Q96PV6 779 aaPredicted RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 GPR22Q99680 433 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 HNRNPABQ99729 332 aaKnown RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 CENPKQ9BS16 269 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 C17orf80Q9BSJ5 609 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 KIFC1Q9BW19 673 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 APOL6Q9BWW8 343 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 GATA5Q9BWX5 397 aaPredicted RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 MAGEB5Q9BZ81 275 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 DNAI2Q9GZS0 605 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 ADAMTS10Q9H324 1103 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 LRRC40Q9H9A6 602 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 COG4Q9H9E3 785 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 WDR6Q9NNW5 1121 aaKnown RBP6.96□□□□□ -1.3
UBR4-212ENST00000475973 VCX3AQ9NNX9 186 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 SNX15Q9NRS6 342 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 UBAP1Q9NZ09 502 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 PTTG2Q9NZH5 202 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 MID2Q9UJV3 735 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 ANKRD6Q9Y2G4 727 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 HEY1Q9Y5J3 304 aa6.96□□□□□ -1.3
UBR4-212ENST00000475973 CHD9Q3L8U1 2897 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms