RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, humanhuman

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-208ENST00000474839 IKBKEQ14164 716 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 TRIM25Q14258 630 aaKnown RBP12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 TBCELQ5QJ74 424 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 STXBP5Q5T5C0 1151 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 DDIASQ8IXT1 998 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 CBR4Q8N4T8 237 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 NPWQ8N729 165 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 APPL2Q8NEU8 664 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 RIN3Q8TB24 985 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 LRCH3Q96II8 777 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 FICDQ9BVA6 458 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 UPF3AQ9H1J1 476 aaKnown RBP12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 NCKIPSDQ9NZQ3 722 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 TSR3Q9UJK0 312 aaKnown RBP12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 STAP1Q9ULZ2 295 aa12.21□□□□□ -0.45
SKIV2L-208ENST00000474839 TMEM114B3SHH9 223 aa12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 CHRNA4P43681 627 aa12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 TAS2R39P59534 338 aa12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 ZYG11AQ6WRX3 759 aa12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 ARHGAP36Q6ZRI8 547 aa12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 PDZD4Q76G19 769 aaPredicted RBP12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 FASTKD5Q7L8L6 764 aaKnown RBP12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 GIPC3Q8TF64 312 aa12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 HEXDCQ8WVB3 486 aa12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 EFHD1Q9BUP0 239 aa12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 PLEKHA5Q9HAU0 1116 aa12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 HTTP42858 3142 aa12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 LRRC37AA6NMS7 1700 aa12.21□□□□□ -0.46
SKIV2L-208ENST00000474839 HACD1B0YJ81 288 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 H6PDO95479 791 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 C22orf31O95567 290 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 AP2A1O95782 977 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 TGFB3P10600 412 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 CHRM3P20309 590 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 PTPN9P43378 593 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 SLC25A52Q3SY17 297 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 ZIK1Q3SY52 487 aaPredicted RBP12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 PAN2Q504Q3 1202 aaKnown RBP12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 FBXO47Q5MNV8 452 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 DUS1LQ6P1R4 473 aaKnown RBP12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 DHFR2Q86XF0 187 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 MTMR14Q8NCE2 650 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 C17orf50Q8WW18 174 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 SEPHS2Q99611 448 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 MLPHQ9BV36 600 aaPredicted RBP12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 FSD1LQ9BXM9 530 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 ULBP1Q9BZM6 244 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 COL2A1P02458 1487 aaPredicted RBP12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 TTC24A2A3L6 582 aaPredicted RBP12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 SPTLC1O15269 473 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 TSPAN1O60635 241 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 RECQL4O94761 1208 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 SLC35E2BP0CK96 405 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 CSE1LP55060 971 aaKnown RBP12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 OTUD3Q5T2D3 398 aaPredicted RBP12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 LBX2Q6XYB7 198 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 FAM35AQ86V20 835 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 TXNDC5Q8NBS9 432 aaKnown RBP12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 MPHOSPH6Q99547 160 aaKnown RBP12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 RNF39Q9H2S5 420 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 MID2Q9UJV3 735 aa12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 PIN4Q9Y237 131 aaKnown RBP12.2□□□□□ -0.46
SKIV2L-208ENST00000474839 SOCS2O14508 198 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 CABYRO75952 493 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 SRP72O76094 671 aaKnown RBP12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 ALOX15P16050 662 aaPredicted RBP12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 KCNA5P22460 613 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 PRDX6P30041 224 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 CACNB2Q08289 660 aaPredicted RBP12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 STX5Q13190 355 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 TTLL4Q14679 1199 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 VPS26BQ4G0F5 336 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 REP15Q6BDI9 236 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 POTEHQ6S545 545 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 SCIMPQ6UWF3 145 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 SETD3Q86TU7 594 aaPredicted RBP12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 SAPCD2Q86UD0 394 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 ZC3HC1Q86WB0 502 aaKnown RBP12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 LSMEM2Q8N112 164 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 DCPSQ96C86 337 aaKnown RBP12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 SLX1AQ9BQ83 275 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 TXNRD2Q9NNW7 524 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 TNFRSF12AQ9NP84 129 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 TBC1D30Q9Y2I9 924 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 YJEFN3A6XGL0 299 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 GAS2O43903 313 aaKnown RBP12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 LGALS2P05162 132 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 CCDC166P0CW27 439 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 ZNF26P17031 533 aaPredicted RBP12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 GABRB3P28472 473 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 CD68P34810 354 aaPredicted RBP12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 C1QTNF8P60827 252 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 STX1BP61266 288 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 VGLL4Q14135 290 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 LDLRAP1Q5SW96 308 aa12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 RBM20Q5T481 1227 aaKnown RBP12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 TMEM102Q8N9M5 508 aaPredicted RBP12.19□□□□□ -0.46
SKIV2L-208ENST00000474839 PBXIP1Q96AQ6 731 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms