RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 RXRGP48443 463 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 AIF1P55008 147 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 GSDMDP57764 484 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 TAS2R38P59533 333 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 ARF5P84085 180 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 RAD51Q06609 339 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 SMAD1Q15797 465 aaKnown RBP15.37■□□□□ 0.05
VARS-223ENST00000474643 SEL1L3Q68CR1 1132 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 LEKR1Q6ZMV7 388 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 H2AFVQ71UI9 128 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 TMPRSS12Q86WS5 348 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 SPATS2Q86XZ4 545 aaKnown RBP15.37■□□□□ 0.05
VARS-223ENST00000474643 MARCH9Q86YJ5 346 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 PAF1Q8N7H5 531 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 OR6K2Q8NGY2 324 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 ARHGEF26Q96DR7 871 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 SPTLC3Q9NUV7 552 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 IP6K2Q9UHH9 426 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 FZD10Q9ULW2 581 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 FREM2Q5SZK8 3169 aa15.37■□□□□ 0.05
VARS-223ENST00000474643 ZZEF1O43149 2961 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 TRABD2BA6NFA1 517 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 ZSCAN5CA6NGD5 496 aaPredicted RBP15.36■□□□□ 0.05
VARS-223ENST00000474643 H3BM21 787 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 MYO1FO00160 1098 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 FFAR2O15552 330 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 LRIG2O94898 1065 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 CYP1A2P05177 515 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 CKMT2P17540 419 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 XPAP23025 273 aaPredicted RBP15.36■□□□□ 0.05
VARS-223ENST00000474643 CLDN2P57739 230 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 NRG1Q02297 640 aaPredicted RBP15.36■□□□□ 0.05
VARS-223ENST00000474643 CYP4F3Q08477 520 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 PIGHQ14442 188 aaPredicted RBP15.36■□□□□ 0.05
VARS-223ENST00000474643 SHBQ15464 509 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 ZNF284Q2VY69 593 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 CFAP58Q5T655 872 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 ZSCAN30Q86W11 494 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 PYROXD2Q8N2H3 581 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 TC2NQ8N9U0 490 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 OR13H1Q8NG92 308 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 FAM174AQ8TBP5 190 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 ZNF564Q8TBZ8 553 aaPredicted RBP15.36■□□□□ 0.05
VARS-223ENST00000474643 ISG20Q96AZ6 181 aaKnown RBP15.36■□□□□ 0.05
VARS-223ENST00000474643 NXPE2Q96DL1 559 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 PDLIM2Q96JY6 352 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 GDAP1L1Q96MZ0 367 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 SLC17A9Q9BYT1 436 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 DHX35Q9H5Z1 703 aaKnown RBP15.36■□□□□ 0.05
VARS-223ENST00000474643 CATSPERBQ9H7T0 1116 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 TMEM248Q9NWD8 314 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 GPATCH2LQ9NWQ4 482 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 DNAJC28Q9NX36 388 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 DONSONQ9NYP3 566 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 AP4E1Q9UPM8 1137 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 RAXQ9Y2V3 346 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 AK5Q9Y6K8 562 aa15.36■□□□□ 0.05
VARS-223ENST00000474643 NEMP2A6NFY4 417 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 FAM72CH0Y354 149 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 FPGTO14772 594 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 DAPK3O43293 454 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 ZMPSTE24O75844 475 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 DKK1O94907 266 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 IGSF6O95976 241 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 UGT2B4P06133 528 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 MIPP30301 263 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 ACADVLP49748 655 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 TPI1P60174 286 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 ILKQ13418 452 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 ACAP1Q15027 740 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 ERMARDQ5T6L9 678 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 HES3Q5TGS1 186 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 FAM72AQ5TYM5 149 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 FAM72DQ6L9T8 149 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 C19orf48Q6RUI8 117 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 PARS2Q7L3T8 475 aaKnown RBP15.35■□□□□ 0.05
VARS-223ENST00000474643 FAM72BQ86X60 149 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 TMEM145Q8NBT3 493 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 OR2AP1Q8NGE2 309 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 ARHGEF2Q92974 986 aaKnown RBP15.35■□□□□ 0.05
VARS-223ENST00000474643 LRIG1Q96JA1 1093 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 BTBD6Q96KE9 485 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 PANX2Q96RD6 677 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 OSBPL1AQ9BXW6 950 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 PACSIN1Q9BY11 444 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 MAGEB5Q9BZ81 275 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 KLHL11Q9NVR0 708 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 WASF2Q9Y6W5 498 aa15.35■□□□□ 0.05
VARS-223ENST00000474643 FAM208BQ5VWN6 2430 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 COL5A1P20908 1838 aaPredicted RBP15.34■□□□□ 0.05
VARS-223ENST00000474643 C16orf96A6NNT2 1141 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 TSPAN6O43657 245 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 LRCH4O75427 683 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 POP4O95707 220 aaKnown RBP15.34■□□□□ 0.05
VARS-223ENST00000474643 PAK4O96013 591 aaPredicted RBP15.34■□□□□ 0.05
VARS-223ENST00000474643 GSRP00390 522 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 CYLC1P35663 651 aaPredicted RBP15.34■□□□□ 0.05
VARS-223ENST00000474643 RABIFP47224 123 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 RHOAP61586 193 aa15.34■□□□□ 0.05
VARS-223ENST00000474643 HNRNPKP61978 463 aaKnown RBP eCLIP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms