RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ST6GAL1P15907 406 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 CDAP32320 146 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 PTPN9P43378 593 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 RUNX2Q13950 521 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 NTRK2Q16620 822 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 ZSCAN23Q3MJ62 389 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 SPECC1Q5M775 1068 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 UBAP2Q5T6F2 1119 aaKnown RBP4.46□□□□□ -1.7
BRCA1-212ENST00000473961 FNDC7Q5VTL7 733 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 TXNDC8Q6A555 127 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 CHST9Q7L1S5 443 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 TBC1D26Q86UD7 250 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 CCDC25Q86WR0 208 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.46□□□□□ -1.7
BRCA1-212ENST00000473961 POMGNT2Q8NAT1 580 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 CCDC191Q8NCU4 936 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 WIPF2Q8TF74 440 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-212ENST00000473961 VOPP1Q96AW1 172 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 CNDP2Q96KP4 475 aaKnown RBP4.46□□□□□ -1.7
BRCA1-212ENST00000473961 BBS4Q96RK4 519 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 CENPOQ9BU64 300 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 MXD3Q9BW11 206 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 HIPK3Q9H422 1215 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 TLK1Q9UKI8 766 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 PACSIN3Q9UKS6 424 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 FBXO4Q9UKT5 387 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 INTS6Q9UL03 887 aaKnown RBP4.46□□□□□ -1.7
BRCA1-212ENST00000473961 MST1RQ04912 1400 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 AOX1Q06278 1338 aa4.46□□□□□ -1.7
BRCA1-212ENST00000473961 ZNF644Q9H582 1327 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-212ENST00000473961 FNDC1Q4ZHG4 1894 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-212ENST00000473961 FRMD3A2A2Y4 597 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 TYW5A2RUC4 315 aaKnown RBP4.45□□□□□ -1.7
BRCA1-212ENST00000473961 C17orf102A2RUQ5 167 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 GRID2IPA4D2P6 1211 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 KRTAP29-1A8MX34 341 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-212ENST00000473961 A8MZ25 164 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 NPIPB8E9PQR5 432 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 TAF4O00268 1085 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 EBAG9O00559 213 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 SLC25A12O75746 678 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 MTA2O94776 668 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 TMCC1O94876 653 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 CSPG5O95196 566 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 TFP02787 698 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 RB1P06400 928 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 CD72P21854 359 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 KLRC2P26717 231 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 ZBTB16Q05516 673 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 RASA2Q15283 850 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 RNPS1Q15287 305 aaKnown RBP4.45□□□□□ -1.7
BRCA1-212ENST00000473961 TMEM266Q2M3C6 531 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 RAB41Q5JT25 222 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 ISM2Q6H9L7 571 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 AAGABQ6PD74 315 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 MOB3CQ70IA8 216 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 TFAP2DQ7Z6R9 452 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 ANKRD23Q86SG2 305 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 VRK3Q8IV63 474 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 PNLDC1Q8NA58 520 aaKnown RBP4.45□□□□□ -1.7
BRCA1-212ENST00000473961 OSR1Q8TAX0 266 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-212ENST00000473961 PSPC1Q8WXF1 523 aaKnown RBP4.45□□□□□ -1.7
BRCA1-212ENST00000473961 IP6K1Q92551 441 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 SARAFQ96BY9 339 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 REPS1Q96D71 796 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 SAT2Q96F10 170 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-212ENST00000473961 PERPQ96FX8 193 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 C1orf74Q96LT6 269 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 TMEM68Q96MH6 324 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 HEMGNQ9BXL5 484 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 RABEP2Q9H5N1 569 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 RNF146Q9NTX7 359 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 SPATS2LQ9NUQ6 558 aaKnown RBP4.45□□□□□ -1.7
BRCA1-212ENST00000473961 GIMAP4Q9NUV9 329 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 CPSF2Q9P2I0 782 aaKnown RBP4.45□□□□□ -1.7
BRCA1-212ENST00000473961 SUCLA2Q9P2R7 463 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-212ENST00000473961 MKLN1Q9UL63 735 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 KAT6AQ92794 2004 aa4.45□□□□□ -1.7
BRCA1-212ENST00000473961 A0A1W2PQ09 198 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 CXorf65A6NEN9 183 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 CDRT15L2A8MXV6 281 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 FAM157AC9JC47 383 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 SMIM22K7EJ46 135 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 RRHO14718 337 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 MT-CYBP00156 380 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-212ENST00000473961 HSP90AB1P08238 724 aaKnown RBP4.44□□□□□ -1.7
BRCA1-212ENST00000473961 MMP3P08254 477 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 ACTN1P12814 892 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 IL11P20809 199 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 BMP5P22003 454 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 EPHB2P29323 1055 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 EEF1DP29692 281 aaKnown RBP4.44□□□□□ -1.7
BRCA1-212ENST00000473961 HOXA13P31271 388 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-212ENST00000473961 CIITAP33076 1130 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 ACSL1P33121 698 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 COPB2P35606 906 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 PIK3CAP42336 1068 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 PMPCAQ10713 525 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 SHBQ15464 509 aa4.44□□□□□ -1.7
BRCA1-212ENST00000473961 ME3Q16798 604 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms