RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ITGA2BP08514 1039 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 USP8P40818 1118 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 CSRP3P50461 194 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 CLCN6P51797 869 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 KRT83P78385 493 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 MORC3Q14149 939 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 CLCA4Q14CN2 919 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 ALG11Q2TAA5 492 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 ATXN7L2Q5T6C5 722 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-223ENST00000473345 MANEALQ5VSG8 457 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 VPS36Q86VN1 386 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 NLRP14Q86W24 1093 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 DRC7Q8IY82 874 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 PCDH19Q8TAB3 1148 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 TSACCQ96A04 125 aaPredicted RBP9.77□□□□□ -0.85
MCF2L-223ENST00000473345 CCDC74AQ96AQ1 378 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 FEM1CQ96JP0 617 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 TRIM62Q9BVG3 475 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 SRRTQ9BXP5 876 aaKnown RBP9.77□□□□□ -0.85
MCF2L-223ENST00000473345 NOL6Q9H6R4 1146 aaKnown RBP9.77□□□□□ -0.85
MCF2L-223ENST00000473345 WDCPQ9H6R7 721 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 PADI4Q9UM07 663 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 BOD1L1Q8NFC6 3051 aa9.77□□□□□ -0.85
MCF2L-223ENST00000473345 UBR5O95071 2799 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-223ENST00000473345 NAV2Q8IVL1 2488 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 SCN8AQ9UQD0 1980 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 ILVBLA1L0T0 632 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 CAPN8A6NHC0 703 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 D6RAR5 112 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 FOXN3O00409 490 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-223ENST00000473345 PSMA7O14818 248 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 PLD2O14939 933 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 INSIG1O15503 277 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 SUV39H1O43463 412 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 MED7O43513 233 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 SRGAP2O75044 1071 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 TCEA3O75764 348 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 GJB6O95452 261 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 UGT2B4P06133 528 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 PON1P27169 355 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 OR1E1P30953 314 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 EIF4A3P38919 411 aaKnown RBP9.76□□□□□ -0.85
MCF2L-223ENST00000473345 DNA2P51530 1060 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 GNA12Q03113 381 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 IRF4Q15306 451 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 HS1BP3Q53T59 392 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 BRMS1LQ5PSV4 323 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 FAM131BQ86XD5 332 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 ZFAND4Q86XD8 727 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 XYLT1Q86Y38 959 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 DCP2Q8IU60 420 aaKnown RBP9.76□□□□□ -0.85
MCF2L-223ENST00000473345 SDR16C5Q8N3Y7 309 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 PCDH20Q8N6Y1 951 aaKnown RBP9.76□□□□□ -0.85
MCF2L-223ENST00000473345 PGAP3Q96FM1 320 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-223ENST00000473345 LIN37Q96GY3 246 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-223ENST00000473345 NSMCE3Q96MG7 304 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 CFAP57Q96MR6 1250 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 KLHL32Q96NJ5 620 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 IL12RB2Q99665 862 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 FUCA2Q9BTY2 467 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 SYNDIG1Q9H7V2 258 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 EPB41L5Q9HCM4 733 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 ATP13A1Q9HD20 1204 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 DYRK4Q9NR20 520 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.76□□□□□ -0.85
MCF2L-223ENST00000473345 HECAQ9UBI9 543 aaPredicted RBP9.76□□□□□ -0.85
MCF2L-223ENST00000473345 GULP1Q9UBP9 304 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 TMEM59LQ9UK28 342 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.76□□□□□ -0.85
MCF2L-223ENST00000473345 LRP4O75096 1905 aa9.76□□□□□ -0.85
MCF2L-223ENST00000473345 COL12A1Q99715 3063 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 PRAMEF33A0A0G2JMD5 474 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 C9orf172C9J069 976 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 H3BM21 787 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 FPGTO14772 594 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 PRAMEF10O60809 474 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 SMC2O95347 1197 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 PRKCGP05129 697 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 TIMP2P16035 220 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 DEUP1Q05D60 604 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 SPIDRQ14159 915 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 NFKBIBQ15653 356 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 TBR1Q16650 682 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 WSCD2Q2TBF2 565 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 ZNF805Q5CZA5 627 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 MACC1Q6ZN28 852 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 RAB11FIP2Q7L804 512 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 ZSWIM9Q86XI8 627 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 PELI3Q8N2H9 469 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 EMC1Q8N766 993 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 ASB12Q8WXK4 309 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 ARHGEF2Q92974 986 aaKnown RBP9.75□□□□□ -0.85
MCF2L-223ENST00000473345 CCDC34Q96HJ3 373 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 C1orf74Q96LT6 269 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 EPAS1Q99814 870 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 WRAP53Q9BUR4 548 aaKnown RBP9.75□□□□□ -0.85
MCF2L-223ENST00000473345 CEP44Q9C0F1 390 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 SPASTQ9UBP0 616 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 APEX2Q9UBZ4 518 aa9.75□□□□□ -0.85
MCF2L-223ENST00000473345 PISDQ9UG56 409 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms