RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 TARSL2A2RTX5 802 aaKnown RBP9.24□□□□□ -0.93
SMC4-214ENST00000472991 H0Y858 1186 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 ZNF821O75541 412 aaPredicted RBP9.24□□□□□ -0.93
SMC4-214ENST00000472991 PYGMP11217 842 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 PECAM1P16284 738 aaPredicted RBP9.24□□□□□ -0.93
SMC4-214ENST00000472991 ZFXP17010 805 aaPredicted RBP9.24□□□□□ -0.93
SMC4-214ENST00000472991 TGM2P21980 687 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 PTPN7P35236 360 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 GARSP41250 739 aaKnown RBP9.24□□□□□ -0.93
SMC4-214ENST00000472991 IL10RBQ08334 325 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 GALNT2Q10471 571 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 TCF15Q12870 199 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 TFDP2Q14188 446 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 ELAVL3Q14576 367 aaKnown RBP9.24□□□□□ -0.93
SMC4-214ENST00000472991 RPS6KA1Q15418 735 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 MAP7D1Q3KQU3 841 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 ZNF569Q5MCW4 686 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 C9orf64Q5T6V5 341 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 SEL1L2Q5TEA6 688 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 TMPRSS6Q8IU80 811 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 STK40Q8N2I9 435 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 SLC35F6Q8N357 371 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 PCDH20Q8N6Y1 951 aaKnown RBP9.24□□□□□ -0.93
SMC4-214ENST00000472991 RHBDD1Q8TEB9 315 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 MRGPRX1Q96LB2 322 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 PRRX2Q99811 253 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 OSBPL8Q9BZF1 889 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 CEP44Q9C0F1 390 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 FBRSQ9HAH7 460 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 PRDM16Q9HAZ2 1276 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 CD93Q9NPY3 652 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 LHX3Q9UBR4 397 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 HCN4Q9Y3Q4 1203 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 DNMT3AQ9Y6K1 912 aaPredicted RBP9.24□□□□□ -0.93
SMC4-214ENST00000472991 GON4LQ3T8J9 2241 aa9.24□□□□□ -0.93
SMC4-214ENST00000472991 MYLKQ15746 1914 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 GOLGA6L9A6NEM1 432 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 KIF5CO60282 957 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 MAFKO60675 156 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 MSX1P28360 303 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 HOXA6P31267 233 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 CETN2P41208 172 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 RECQLP46063 649 aaPredicted RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 PSMD8P48556 350 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 CCNHP51946 323 aaPredicted RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 NRLP54845 237 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 RHOAP61586 193 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 SLC10A7Q0GE19 358 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 LBRQ14739 615 aaKnown RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 TLR1Q15399 786 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 CYTH1Q15438 398 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 ZNF528Q3MIS6 628 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 INO80DQ53TQ3 878 aaPredicted RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 CARD16Q5EG05 197 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 ATXN7L2Q5T6C5 722 aaPredicted RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 TMCO4Q5TGY1 634 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 CCDC181Q5TID7 509 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 ZNF776Q68DI1 518 aaPredicted RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 DPY19L3Q6ZPD9 716 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 BBS12Q6ZW61 710 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 WDR5BQ86VZ2 330 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 MMAAQ8IVH4 418 aaKnown RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 RYBPQ8N488 228 aaPredicted RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 PLPP7Q8NBV4 271 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 CHST14Q8NCH0 376 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 OR2A12Q8NGT7 310 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 OR6K2Q8NGY2 324 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 CASKIN2Q8WXE0 1202 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 OR8D1Q8WZ84 308 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 PRCCQ92733 491 aaPredicted RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 NELL1Q92832 810 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 ISG20Q96AZ6 181 aaKnown RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 HDAC11Q96DB2 347 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 SIPA1Q96FS4 1042 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 EXOC2Q96KP1 924 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 CCDC114Q96M63 670 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 ZNF599Q96NL3 588 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 OLFM3Q96PB7 478 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 TLR10Q9BXR5 811 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 RSPH9Q9H1X1 276 aaPredicted RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 ZSCAN32Q9NX65 697 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 SAE1Q9UBE0 346 aaPredicted RBP9.23□□□□□ -0.93
SMC4-214ENST00000472991 EBF1Q9UH73 591 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 RAPGEFL1Q9UHV5 662 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 ADAMTS9Q9P2N4 1935 aa9.23□□□□□ -0.93
SMC4-214ENST00000472991 CCDC163A0A0D9SF12 145 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 APOC4-APOC2K7ER74 178 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 KCNK3O14649 394 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 ENC1O14682 589 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 PPP1R12AO14974 1030 aaPredicted RBP9.22□□□□□ -0.93
SMC4-214ENST00000472991 MCF2LO15068 1137 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 ALOX15BO15296 676 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 MID1O15344 667 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 RNASEH1O60930 286 aaKnown RBP9.22□□□□□ -0.93
SMC4-214ENST00000472991 IGSF6O95976 241 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 PEX11BO96011 259 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 GSRP00390 522 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 IL1BP01584 269 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 APOC2P02655 101 aa9.22□□□□□ -0.93
SMC4-214ENST00000472991 DNTTP04053 509 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms