RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 GALNT15Q8N3T1 639 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 KLHL36Q8N4N3 616 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 MINDY1Q8N5J2 469 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 ALLCQ8N6M5 410 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 ARL14EPQ8N8R7 260 aaPredicted RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 TERB1Q8NA31 727 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 IL17RCQ8NAC3 791 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 B3GALNT2Q8NCR0 500 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 CCDC150Q8NCX0 1101 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 DEFB124Q8NES8 71 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 CADM4Q8NFZ8 388 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 OR6B3Q8NGW1 331 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 NOC3LQ8WTT2 800 aaKnown RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 HMGB4Q8WW32 186 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 CFHR4Q92496 578 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 TAF4BQ92750 862 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 FBXO32Q969P5 355 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 SKA1Q96BD8 255 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 SAAL1Q96ER3 474 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 CCDC34Q96HJ3 373 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 PCED1BQ96HM7 432 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 C16orf92Q96LL3 132 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 FIZ1Q96SL8 496 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 PLIN2Q99541 437 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 PKMYT1Q99640 499 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 SCNM1Q9BWG6 230 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 GTPBP2Q9BX10 602 aaKnown RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 ZSCAN16Q9H4T2 348 aaPredicted RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 CD248Q9HCU0 757 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 PNPLA8Q9NP80 782 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 TLR8Q9NR97 1041 aaKnown RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 BLOC1S4Q9NUP1 217 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 INTS7Q9NVH2 962 aaKnown RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 C2orf42Q9NWW7 574 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 UCKL1Q9NWZ5 548 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 CFAP97Q9P2B7 532 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 B4GALT6Q9UBX8 382 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 ZDHHC9Q9Y397 364 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 PCDHGB2Q9Y5G2 931 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 SRPRBQ9Y5M8 271 aaKnown RBP3.68□□□□□ -1.82
XRN1-209ENST00000472625 NOTCH4Q99466 2003 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 GREB1Q4ZG55 1949 aa3.68□□□□□ -1.82
XRN1-209ENST00000472625 TSC2P49815 1807 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 CNOT1A5YKK6 2376 aaKnown RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 KIF26AQ9ULI4 1882 aaPredicted RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 ANKRD11Q6UB99 2663 aaPredicted RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 A0A1B0GTW7 788 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 SLC12A8A0AV02 714 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 VPS37CA5D8V6 355 aaPredicted RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 PRAMEF25A6NGN4 478 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 SRRM3A6NNA2 597 aaPredicted RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 ANKRD63C9JTQ0 380 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 CDX4O14627 284 aaPredicted RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 DCLK1O15075 740 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 YKT6O15498 198 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 FLRT2O43155 660 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 AKAP8O43823 692 aaKnown RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 CACNG3O60359 315 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 DFNA5O60443 496 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 SYNCRIPO60506 623 aaKnown RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 TLR5O60602 858 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 TULP3O75386 442 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 RPN1P04843 607 aaKnown RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 MYL1P05976 194 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 FAM200BP0CF97 657 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 DLATP10515 647 aaKnown RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 RALAP11233 206 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 ACADMP11310 421 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 PTX3P26022 381 aaPredicted RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 CD6P30203 668 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 HNF1BP35680 557 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 ATP5C1P36542 298 aaKnown RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 PTGER3P43115 390 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 GPR15P49685 360 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 SLC5A3P53794 718 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 PSMC1P62191 440 aaKnown RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 IRF9Q00978 393 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 ZBTB16Q05516 673 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 KDSRQ06136 332 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 ZNF33AQ06730 810 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 ENPEPQ07075 957 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 TAF10Q12962 218 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 BIRC3Q13489 604 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 PSMD6Q15008 389 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 TRIP6Q15654 476 aaKnown RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 ZNF699Q32M78 642 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 PLEKHG6Q3KR16 790 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 WDR72Q3MJ13 1102 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 TTC31Q49AM3 519 aaPredicted RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 ZC2HC1CQ53FD0 456 aaPredicted RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 ZNF667Q5HYK9 610 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 MDH1BQ5I0G3 518 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 CRELD2Q6UXH1 353 aaPredicted RBP3.67□□□□□ -1.82
XRN1-209ENST00000472625 TRAPPC11Q7Z392 1133 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 ANKS1BQ7Z6G8 1248 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 GLRX5Q86SX6 157 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 PIP4P1Q86T03 277 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 UNC93AQ86WB7 457 aa3.67□□□□□ -1.82
XRN1-209ENST00000472625 NAXDQ8IW45 347 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms