RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 DHRS4L1P0CG22 281 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 CST5P28325 142 aaPredicted RBP4.85□□□□□ -1.63
CD46-213ENST00000471987 SERPINB3P29508 390 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 HILS1P60008 231 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 GOLGA8FQ08AF8 430 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 LPIN1Q14693 890 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 MAP9Q49MG5 647 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 PGBD5Q8N414 524 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 AADATQ8N5Z0 425 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 ANKRD44Q8N8A2 993 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 SETD9Q8NE22 299 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 ZMIZ2Q8NF64 920 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 TRIB2Q92519 343 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 EPYCQ99645 322 aa4.85□□□□□ -1.63
CD46-213ENST00000471987 MMTAG2Q9BU76 263 aaKnown RBP4.85□□□□□ -1.63
CD46-213ENST00000471987 CTPS1P17812 591 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 HTR3AP46098 478 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 DDR1Q08345 913 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 BLMHQ13867 455 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 ME3Q16798 604 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 GJB7Q6PEY0 223 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 DENND6AQ8IWF6 608 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 CACNA2D3Q8IZS8 1091 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 LMNTD1Q8N9Z9 388 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 RNF183Q96D59 192 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 MTBPQ96DY7 904 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 ZNF385AQ96PM9 386 aaKnown RBP4.84□□□□□ -1.63
CD46-213ENST00000471987 SPRY4Q9C004 299 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 ZNF700Q9H0M5 742 aa4.84□□□□□ -1.63
CD46-213ENST00000471987 NTN3O00634 580 aaPredicted RBP4.83□□□□□ -1.64
CD46-213ENST00000471987 SERPINC1P01008 464 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 IGHV4-30-4P0DP06 118 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 AMD1P17707 334 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 PTPN9P43378 593 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 CENPAP49450 140 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 SLC18A2Q05940 514 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 CAPSQ13938 189 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 DHX34Q14147 1143 aaKnown RBP4.83□□□□□ -1.64
CD46-213ENST00000471987 CALCRLQ16602 461 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 PLEKHO1Q53GL0 409 aaPredicted RBP4.83□□□□□ -1.64
CD46-213ENST00000471987 ZNF484Q5JVG2 852 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 MEX3BQ6ZN04 569 aaKnown RBP4.83□□□□□ -1.64
CD46-213ENST00000471987 MYLK4Q86YV6 388 aaPredicted RBP4.83□□□□□ -1.64
CD46-213ENST00000471987 MB21D2Q8IYB1 491 aaPredicted RBP4.83□□□□□ -1.64
CD46-213ENST00000471987 GHDCQ8N2G8 530 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 SPATA20Q8TB22 786 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 LTV1Q96GA3 475 aaPredicted RBP4.83□□□□□ -1.64
CD46-213ENST00000471987 SCMH1Q96GD3 660 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 LRFN5Q96NI6 719 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 OR1F2PQ96R84 312 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 NPLQ9BXD5 320 aaPredicted RBP4.83□□□□□ -1.64
CD46-213ENST00000471987 SDF2L1Q9HCN8 221 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 OR6C3Q9NZP0 311 aa4.83□□□□□ -1.64
CD46-213ENST00000471987 PRAC2D3DTV9 90 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 TULP2O00295 520 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 GAGE7O76087 117 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 AFPP02771 609 aaKnown RBP4.82□□□□□ -1.64
CD46-213ENST00000471987 GAGE12FP0CL80 117 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 GAGE12GP0CL81 117 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 GAGE12IP0CL82 117 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 GAGE1Q13065 139 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 GAGE4Q13068 117 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 HDAC1Q13547 482 aaPredicted RBP4.82□□□□□ -1.64
CD46-213ENST00000471987 MRGPRG-AS1Q2M3A8 158 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 FBXL22Q6P050 247 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 UNQ6126/PRO20091Q6UXV3 157 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 ZNF771Q7L3S4 317 aaPredicted RBP4.82□□□□□ -1.64
CD46-213ENST00000471987 DCUN1D3Q8IWE4 304 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 CCDC105Q8IYK2 499 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 CSGALNACT1Q8TDX6 532 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 WBP1Q96G27 269 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 CTDSP1Q9GZU7 261 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 SAYSD1Q9NPB0 183 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 HDAC6Q9UBN7 1215 aa4.82□□□□□ -1.64
CD46-213ENST00000471987 PRR23AA6NEV1 266 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 NPIPB11E5RHQ5 1161 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 LMX1BO60663 402 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 CGAP01215 116 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 KRT10P13645 584 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 PRKAA2P54646 552 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 ARSFP54793 590 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 ECT2LQ008S8 904 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 CCDC38Q502W7 563 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 CCDC129Q6ZRS4 1044 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 C9orf139Q6ZV77 190 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 TUBA1AQ71U36 451 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 MON1AQ86VX9 555 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 TMEM255BQ8WV15 326 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 SORCS1Q8WY21 1168 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 SDCCAG3Q96C92 435 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 MASTLQ96GX5 879 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 RBM17Q96I25 401 aaKnown RBP4.81□□□□□ -1.64
CD46-213ENST00000471987 YME1L1Q96TA2 773 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 TUBA1CQ9BQE3 449 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 EVA1AQ9H8M9 152 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 ENTPD7Q9NQZ7 604 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 SPATS2LQ9NUQ6 558 aaKnown RBP4.81□□□□□ -1.64
CD46-213ENST00000471987 ANKRD10Q9NXR5 420 aa4.81□□□□□ -1.64
CD46-213ENST00000471987 IFT80Q9P2H3 777 aaPredicted RBP4.81□□□□□ -1.64
CD46-213ENST00000471987 SRP68Q9UHB9 627 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms