RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 ARMCX4Q5H9R4 360 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 PPP1R26Q5T8A7 1209 aaPredicted RBP10.63□□□□□ -0.71
RRP1B-202ENST00000470886 EEF1DP3Q658K8 133 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 SZRD1Q7Z422 152 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 SERAC1Q96JX3 654 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 SENP8Q96LD8 212 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 UROC1Q96N76 676 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 LGMNQ99538 433 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 OSBPL6Q9BZF3 934 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 PCDHB5Q9Y5E4 795 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 CNTNAP2Q9UHC6 1331 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 NRP2O60462 931 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 DNAJA2O60884 412 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 KCNH1O95259 989 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 CCNHP51946 323 aaPredicted RBP10.63□□□□□ -0.71
RRP1B-202ENST00000470886 CRADDP78560 199 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 SFSWAPQ12872 951 aaKnown RBP10.63□□□□□ -0.71
RRP1B-202ENST00000470886 NEDD8Q15843 81 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 TIMM50Q3ZCQ8 353 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 TEX44Q53QW1 395 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 GNASQ5JWF2 1037 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 RNF220Q5VTB9 566 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 SPATA19Q7Z5L4 167 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 SIAH1Q8IUQ4 282 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 DSELQ8IZU8 1212 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 PDPRQ8NCN5 879 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 C12orf42Q96LP6 360 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 SLC9A7Q96T83 725 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 DCUN1D5Q9BTE7 237 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 HGH1Q9BTY7 390 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 GLIS2Q9BZE0 524 aaPredicted RBP10.63□□□□□ -0.71
RRP1B-202ENST00000470886 APOBEC3GQ9HC16 384 aaKnown RBP10.63□□□□□ -0.71
RRP1B-202ENST00000470886 TMCC3Q9ULS5 477 aa10.63□□□□□ -0.71
RRP1B-202ENST00000470886 SLC12A8A0AV02 714 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 ZSCAN9O15535 394 aaPredicted RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 NPHS1O60500 1241 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 CST3P01034 146 aaPredicted RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 ZNF286BP0CG31 522 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 UMPSP11172 480 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 IL2P60568 153 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 EFEMP1Q12805 493 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 FAM187BQ17R55 369 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 UBE2Q1Q7Z7E8 422 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 ATG16L2Q8NAA4 619 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 PPP3R2Q96LZ3 170 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 UNC93B1Q9H1C4 597 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 LIMD1Q9UGP4 676 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 PDZK1P1A8MUH7 402 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 IFRD1O00458 451 aaPredicted RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 TFEBP19484 476 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 CES1P23141 567 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 SOX11P35716 441 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 OTUD3Q5T2D3 398 aaPredicted RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 CYP4Z1Q86W10 505 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 GPSM1Q86YR5 675 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 OMA1Q96E52 524 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 PLEKHA8Q96JA3 519 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 PRRG3Q9BZD7 231 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 SENP6Q9GZR1 1112 aaPredicted RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 ACTR8Q9H981 624 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 IGSF9Q9P2J2 1179 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 MAGEL2Q9UJ55 1249 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 AZIN1O14977 448 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 PEX1O43933 1283 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 FGFR1P11362 822 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 ECHS1P30084 290 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 RPL9P32969 192 aaKnown RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 MILR1Q7Z6M3 343 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 HERC6Q8IVU3 1022 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 PTGR2Q8N8N7 351 aaPredicted RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 ZFAND2BQ8WV99 257 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 FIG4Q92562 907 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 SPATA16Q9BXB7 569 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 ZCWPW1Q9H0M4 648 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 XPNPEP1Q9NQW7 623 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 SCAF8Q9UPN6 1271 aaKnown RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 TBC1D30Q9Y2I9 924 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 NCF1BA6NI72 391 aaPredicted RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 NCF1CA8MVU1 366 aaPredicted RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 NCF1P14598 390 aaPredicted RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 ADRA1BP35368 520 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 PRKG2Q13237 762 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 DEPDC1Q5TB30 811 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 LMO3Q8TAP4 145 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 PNPT1Q8TCS8 783 aaKnown RBP10.62□□□□□ -0.71
RRP1B-202ENST00000470886 ROPN1LQ96C74 230 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 CCNB1IP1Q9NPC3 277 aa10.62□□□□□ -0.71
RRP1B-202ENST00000470886 FAM20BO75063 409 aa10.61□□□□□ -0.71
RRP1B-202ENST00000470886 CSDE1O75534 798 aaKnown RBP10.61□□□□□ -0.71
RRP1B-202ENST00000470886 ZMPSTE24O75844 475 aa10.61□□□□□ -0.71
RRP1B-202ENST00000470886 CAPN1P07384 714 aa10.61□□□□□ -0.71
RRP1B-202ENST00000470886 USP17L7P0C7H9 530 aa10.61□□□□□ -0.71
RRP1B-202ENST00000470886 CCNA2P20248 432 aa10.61□□□□□ -0.71
RRP1B-202ENST00000470886 AKAP5P24588 427 aa10.61□□□□□ -0.71
RRP1B-202ENST00000470886 CNTN1Q12860 1018 aa10.61□□□□□ -0.71
RRP1B-202ENST00000470886 USP4Q13107 963 aa10.61□□□□□ -0.71
RRP1B-202ENST00000470886 CDH18Q13634 790 aa10.61□□□□□ -0.71
RRP1B-202ENST00000470886 MFSD10Q14728 455 aa10.61□□□□□ -0.71
RRP1B-202ENST00000470886 LPCAT4Q643R3 524 aa10.61□□□□□ -0.71
RRP1B-202ENST00000470886 DCLRE1AQ6PJP8 1040 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms