RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 UBP1Q9NZI7 540 aa11.12□□□□□ -0.63
SND1-208ENST00000470463 VPS28Q9UK41 221 aa11.12□□□□□ -0.63
SND1-208ENST00000470463 CHD5Q8TDI0 1954 aa11.12□□□□□ -0.63
SND1-208ENST00000470463 OBSL1O75147 1896 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 TRIM49D1C9J1S8 452 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 CBX4O00257 560 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 COPEO14579 308 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 INSIG1O15503 277 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 TSPAN3O60637 253 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 SIN3BO75182 1162 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 NDST3O95803 873 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 CCNFP41002 786 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 CSNK1DP48730 415 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 AP1S1P61966 158 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 CRADDP78560 199 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 DSC2Q02487 901 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 SULT2A1Q06520 285 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 THOC5Q13769 683 aaKnown RBP11.11□□□□□ -0.63
SND1-208ENST00000470463 EFTUD2Q15029 972 aaKnown RBP eCLIP11.11□□□□□ -0.631e-6■■■■■ 32.2
SND1-208ENST00000470463 INSCQ1MX18 579 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 HHATQ5VTY9 493 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 TRMT10BQ6PF06 316 aaKnown RBP11.11□□□□□ -0.63
SND1-208ENST00000470463 RGS9BPQ6ZS82 235 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 CCDC91Q7Z6B0 441 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 CPLX4Q7Z7G2 160 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 GALNT7Q86SF2 657 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 TAX1BP1Q86VP1 789 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 CNTN4Q8IWV2 1026 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 ANKRD42Q8N9B4 389 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 OR7D4Q8NG98 312 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 SHKBP1Q8TBC3 707 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 MDM1Q8TC05 714 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 SH3RF2Q8TEC5 729 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 DENND1AQ8TEH3 1009 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 CKAP2Q8WWK9 683 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 GRAMD1AQ96CP6 724 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 MYEOVQ96EZ4 313 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 ZNF419Q96HQ0 510 aaPredicted RBP11.11□□□□□ -0.63
SND1-208ENST00000470463 SLC22A12Q96S37 553 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 C19orf43Q9BQ61 176 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 PLCD4Q9BRC7 762 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 FEM1AQ9BSK4 669 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 SLC2A11Q9BYW1 496 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 VPS11Q9H270 941 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 PIDD1Q9HB75 910 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 CHRAC1Q9NRG0 131 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 C20orf96Q9NUD7 363 aaPredicted RBP11.11□□□□□ -0.63
SND1-208ENST00000470463 DNMT3BQ9UBC3 853 aaKnown RBP11.11□□□□□ -0.63
SND1-208ENST00000470463 GGA2Q9UJY4 613 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 DENND4CQ5VZ89 1909 aa11.11□□□□□ -0.63
SND1-208ENST00000470463 CCDC195A0A1B0GUA6 201 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.1□□□□□ -0.63
SND1-208ENST00000470463 CXorf49A8MYA2 514 aaPredicted RBP11.1□□□□□ -0.63
SND1-208ENST00000470463 SLC7A4O43246 635 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 ASMTLO95671 621 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 CRTAMO95727 393 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 MMP2P08253 660 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 HOXB8P17481 243 aaPredicted RBP11.1□□□□□ -0.63
SND1-208ENST00000470463 CRHR1P34998 444 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 SERPINB8P50452 374 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 LIMK2P53671 638 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 RPL26P61254 145 aaKnown RBP11.1□□□□□ -0.63
SND1-208ENST00000470463 DMTNQ08495 405 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 CAMK1Q14012 370 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 GRM3Q14832 879 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 PCSK7Q16549 785 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 GKAP1Q5VSY0 366 aaPredicted RBP11.1□□□□□ -0.63
SND1-208ENST00000470463 KYAT3Q6YP21 454 aaKnown RBP11.1□□□□□ -0.63
SND1-208ENST00000470463 ANKS4BQ8N8V4 417 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 BRSK1Q8TDC3 778 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 CCT8L2Q96SF2 557 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 GAS2L1Q99501 681 aaPredicted RBP11.1□□□□□ -0.63
SND1-208ENST00000470463 RBBP8Q99708 897 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 APOL2Q9BQE5 337 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 TLE6Q9H808 572 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 SFXN1Q9H9B4 322 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 TREX1Q9NSU2 369 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 HACD3Q9P035 362 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 DCDC2Q9UHG0 476 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 GRID1Q9ULK0 1009 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 RPL26L1Q9UNX3 145 aaKnown RBP11.1□□□□□ -0.63
SND1-208ENST00000470463 OR51B4Q9Y5P0 310 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 HCFC2Q9Y5Z7 792 aa11.1□□□□□ -0.63
SND1-208ENST00000470463 A0A1W2PPM1 405 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 A0A1W2PQ67 120 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 EBAG9O00559 213 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 PFDN6O15212 129 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 GLRA3O75311 464 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 ZMPSTE24O75844 475 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 TMCC1O94876 653 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 MPOP05164 745 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 GSTA1P08263 222 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 ITGA2BP08514 1039 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 PYGBP11216 843 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 EPCAMP16422 314 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 TPH1P17752 444 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 CR2P20023 1033 aa11.09□□□□□ -0.63
SND1-208ENST00000470463 IRS1P35568 1242 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms