RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 HS3ST3A1Q9Y663 406 aa8.34□□□□□ -1.07
LSM2-210ENST00000470086 ZNF891A8MT65 544 aaPredicted RBP8.33□□□□□ -1.08
LSM2-210ENST00000470086 I6L893 689 aaPredicted RBP8.33□□□□□ -1.08
LSM2-210ENST00000470086 LEFTY1O75610 366 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 SORBS2O94875 1100 aaKnown RBP8.33□□□□□ -1.08
LSM2-210ENST00000470086 LTFP02788 710 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 ANXA6P08133 673 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 ITIH2P19823 946 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 CHRNA3P32297 505 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 NOS2P35228 1153 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 SLC11A2P49281 568 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 DPYDQ12882 1025 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 FAM46CQ5VWP2 391 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 SYPL2Q5VXT5 272 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 PMF1Q6P1K2 205 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 FOXR2Q6PJQ5 311 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 ERN2Q76MJ5 926 aaKnown RBP8.33□□□□□ -1.08
LSM2-210ENST00000470086 FAM114A1Q8IWE2 563 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 GRAMD1CQ8IYS0 662 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 CACNA2D3Q8IZS8 1091 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 IL22RA1Q8N6P7 574 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 TP53I13Q8NBR0 393 aaPredicted RBP8.33□□□□□ -1.08
LSM2-210ENST00000470086 CCL4L1Q8NHW4 92 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 TFAP2BQ92481 460 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 ERCC4Q92889 916 aaPredicted RBP8.33□□□□□ -1.08
LSM2-210ENST00000470086 SLC45A3Q96JT2 553 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 CCDC74BQ96LY2 380 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 HEXIM2Q96MH2 286 aaKnown RBP8.33□□□□□ -1.08
LSM2-210ENST00000470086 TMEM74Q96NL1 305 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 TRIM55Q9BYV6 548 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 BLZF1Q9H2G9 400 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 ZSCAN16Q9H4T2 348 aaPredicted RBP8.33□□□□□ -1.08
LSM2-210ENST00000470086 KBTBD4Q9NVX7 518 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 OCIAD1Q9NX40 245 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 DONSONQ9NYP3 566 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 NCKIPSDQ9NZQ3 722 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 TFIP11Q9UBB9 837 aaKnown RBP8.33□□□□□ -1.08
LSM2-210ENST00000470086 KCNMB2Q9Y691 235 aa8.33□□□□□ -1.08
LSM2-210ENST00000470086 IGHV5-10-1A0A0J9YXX1 117 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 TCP11X1B4DZS4 312 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 O00370 1275 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 ST8SIA5O15466 376 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 VPS4BO75351 444 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 CNTN5O94779 1100 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 ENDOD1O94919 500 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 IGLV3-25P01717 112 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 P4HA1P13674 534 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 MPSTP25325 297 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 BRD2P25440 801 aaKnown RBP8.32□□□□□ -1.08
LSM2-210ENST00000470086 PLK1P53350 603 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 MAZP56270 477 aaKnown RBP8.32□□□□□ -1.08
LSM2-210ENST00000470086 B4GALNT1Q00973 533 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 CEBPZQ03701 1054 aaKnown RBP8.32□□□□□ -1.08
LSM2-210ENST00000470086 BST2Q10589 180 aaKnown RBP8.32□□□□□ -1.08
LSM2-210ENST00000470086 C4orf48Q5BLP8 95 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 ZC3H12AQ5D1E8 599 aaKnown RBP8.32□□□□□ -1.08
LSM2-210ENST00000470086 CERCAMQ5T4B2 595 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 C16orf46Q6P387 395 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 NEK5Q6P3R8 708 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 C22orf39Q6P5X5 142 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 MACC1Q6ZN28 852 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 DPY19L3Q6ZPD9 716 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 VPS36Q86VN1 386 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 CCDC117Q8IWD4 279 aaPredicted RBP8.32□□□□□ -1.08
LSM2-210ENST00000470086 UBR7Q8N806 425 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 Q8NA96 180 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 PATE1Q8WXA2 126 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 STARD8Q92502 1023 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 TAF4BQ92750 862 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 ART4Q93070 314 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 AZIN2Q96A70 460 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 CENPTQ96BT3 561 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 FEM1AQ9BSK4 669 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 C1QTNF2Q9BXJ5 285 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 UBXN6Q9BZV1 441 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 SPRY4Q9C004 299 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 KCTD10Q9H3F6 313 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 APMAPQ9HDC9 416 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 ANLNQ9NQW6 1124 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 CUEDC1Q9NWM3 386 aaPredicted RBP8.32□□□□□ -1.08
LSM2-210ENST00000470086 VPS51Q9UID3 782 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 PILRAQ9UKJ1 303 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 VPS4AQ9UN37 437 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 GPR34Q9UPC5 381 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 COQ6Q9Y2Z9 468 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 PCDHB11Q9Y5F2 797 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 SRPRBQ9Y5M8 271 aaKnown RBP8.32□□□□□ -1.08
LSM2-210ENST00000470086 SNX10Q9Y5X0 201 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 CCDC168Q8NDH2 2452 aa8.32□□□□□ -1.08
LSM2-210ENST00000470086 NAV3Q8IVL0 2385 aa8.31□□□□□ -1.08
LSM2-210ENST00000470086 ARHGAP10A1A4S6 786 aa8.31□□□□□ -1.08
LSM2-210ENST00000470086 EFCAB7A8K855 629 aa8.31□□□□□ -1.08
LSM2-210ENST00000470086 B4GAT1O43505 415 aa8.31□□□□□ -1.08
LSM2-210ENST00000470086 MOCS3O95396 460 aa8.31□□□□□ -1.08
LSM2-210ENST00000470086 ZNF18P17022 549 aa8.31□□□□□ -1.08
LSM2-210ENST00000470086 CD82P27701 267 aa8.31□□□□□ -1.08
LSM2-210ENST00000470086 NEK3P51956 506 aa8.31□□□□□ -1.08
LSM2-210ENST00000470086 OR1D5P58170 312 aa8.31□□□□□ -1.08
LSM2-210ENST00000470086 EIF4EBP2Q13542 120 aaPredicted RBP8.31□□□□□ -1.08
LSM2-210ENST00000470086 HLTFQ14527 1009 aaKnown RBP eCLIP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms