RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 GPR68Q15743 365 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 RPE65Q16518 533 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 HLFQ16534 295 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 ZNF585BQ52M93 769 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 PRAMEF19Q5SWL8 479 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 NCAPH2Q6IBW4 605 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 TYW3Q6IPR3 259 aaKnown RBP3.35□□□□□ -1.87
TPR-204ENST00000469463 RETSATQ6NUM9 610 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 PDXDC1Q6P996 788 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 CPOQ8IVL8 374 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 CPXM2Q8N436 756 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 TNIP2Q8NFZ5 429 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 URB1-AS1Q96HZ7 61 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 ZNF479Q96JC4 524 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 MPHOSPH8Q99549 860 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 SEZ6LQ9BYH1 1024 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 TAOK3Q9H2K8 898 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 SLCO5A1Q9H2Y9 848 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 BABAM1Q9NWV8 329 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 PLK2Q9NYY3 685 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 CNOT7Q9UIV1 285 aaKnown RBP3.35□□□□□ -1.87
TPR-204ENST00000469463 ARHGAP26Q9UNA1 814 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 PAM16Q9Y3D7 125 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 PCDHGB5Q9Y5G0 923 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 CKAP5Q14008 2032 aa3.35□□□□□ -1.87
TPR-204ENST00000469463 TEX13CA0A0J9YWL9 993 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 LINC01553A4QN01 128 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 PABPN1LA6NDY0 278 aaKnown RBP3.34□□□□□ -1.87
TPR-204ENST00000469463 C4orf47A7E2U8 309 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 NCAM2O15394 837 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 LCATP04180 440 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 SLC2A4P14672 509 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 NAGAP17050 411 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 HOXD3P31249 432 aaPredicted RBP3.34□□□□□ -1.87
TPR-204ENST00000469463 PSMC2P35998 433 aaKnown RBP3.34□□□□□ -1.87
TPR-204ENST00000469463 RPL3P39023 403 aaKnown RBP3.34□□□□□ -1.87
TPR-204ENST00000469463 NUDT6P53370 316 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 RPP30P78346 268 aaKnown RBP3.34□□□□□ -1.87
TPR-204ENST00000469463 ZXDBP98169 803 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 EFNB1P98172 346 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 CHRNDQ07001 517 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 GALNT2Q10471 571 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 EFR3AQ14156 821 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 HNF4GQ14541 408 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 ZNF667Q5HYK9 610 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 TRILQ7L0X0 811 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 LRRC8DQ7L1W4 858 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 RRM2BQ7LG56 351 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 GPAT4Q86UL3 456 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 FAM160B2Q86V87 743 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 CCDC105Q8IYK2 499 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 ZDHHC23Q8IYP9 409 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 KIAA2013Q8IYS2 634 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 PRR26Q8N8Z3 221 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 PPM1EQ8WY54 764 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 USP13Q92995 863 aaPredicted RBP3.34□□□□□ -1.87
TPR-204ENST00000469463 OTULINQ96BN8 352 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 MED30Q96HR3 178 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 MAELQ96JY0 434 aaKnown RBP3.34□□□□□ -1.87
TPR-204ENST00000469463 BBS4Q96RK4 519 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 SIN3AQ96ST3 1273 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 YME1L1Q96TA2 773 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 MEIS3Q99687 375 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 INTS2Q9H0H0 1204 aaKnown RBP3.34□□□□□ -1.87
TPR-204ENST00000469463 VEZTQ9HBM0 779 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 SAGE1Q9NXZ1 904 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 PCDHA7Q9UN72 937 aa3.34□□□□□ -1.87
TPR-204ENST00000469463 EVPLQ92817 2033 aa3.34□□□□□ -1.88
TPR-204ENST00000469463 NOTCH4Q99466 2003 aa3.34□□□□□ -1.88
TPR-204ENST00000469463 TRIP12Q14669 1992 aaPredicted RBP3.33□□□□□ -1.88
TPR-204ENST00000469463 C17orf113A0A1B0GUU1 675 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 FAM90A7PA6NKC0 464 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 FAM90A22PA8MWA6 464 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 FAM90A12PA8MX19 464 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 FAM90A23PA8MXZ1 464 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 CHL1O00533 1208 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 TNPO2O14787 897 aaKnown RBP3.33□□□□□ -1.88
TPR-204ENST00000469463 SERPINI2O75830 405 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 PAPSS2O95340 614 aaPredicted RBP3.33□□□□□ -1.88
TPR-204ENST00000469463 PYGLP06737 847 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 PCNAP12004 261 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 LIFRP42702 1097 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 PAFAH1B1P43034 410 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 GPD2P43304 727 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 RFX5P48382 616 aaPredicted RBP3.33□□□□□ -1.88
TPR-204ENST00000469463 CCR5P51681 352 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 CDH15P55291 814 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 SLC18A2Q05940 514 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.33□□□□□ -1.88
TPR-204ENST00000469463 DSC1Q08554 894 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 ITGADQ13349 1161 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 PKP1Q13835 747 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 MYBPC2Q14324 1141 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 ARHGEF6Q15052 776 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 PLCB4Q15147 1175 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 SLC4A8Q2Y0W8 1093 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 KRTAP27-1Q3LI81 207 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 WDR45BQ5MNZ6 344 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 LRRC8EQ6NSJ5 796 aa3.33□□□□□ -1.88
TPR-204ENST00000469463 CYP26C1Q6V0L0 522 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms