RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 RFC1P35251 1148 aaPredicted RBP5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 MLH1P40692 756 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 RGS2P41220 211 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 RNPS1Q15287 305 aaKnown RBP5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 MEA1Q16626 185 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 SMN1Q16637 294 aaKnown RBP5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 C10orf25Q5T742 122 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 MORN5Q5VZ52 161 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 NCEH1Q6PIU2 408 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 LRRC57Q8N9N7 239 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 MCPH1Q8NEM0 835 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 POMGNT1Q8WZA1 660 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 USP6NLQ92738 828 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 INTS12Q96CB8 462 aaKnown RBP5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 TRMOQ9BU70 441 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 QTRT1Q9BXR0 403 aaKnown RBP5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 TMX4Q9H1E5 349 aaPredicted RBP5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 WDR6Q9NNW5 1121 aaKnown RBP5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 PCDHB16Q9NRJ7 776 aa5.32□□□□□ -1.56
GAPVD1-211ENST00000467707 KAT6AQ92794 2004 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 TTBK1Q5TCY1 1321 aaPredicted RBP5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 DDTLA6NHG4 134 aaPredicted RBP5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 LIPT2A6NK58 231 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 KCNU1A8MYU2 1149 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 PTP4A3O75365 173 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 TFP02787 698 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 NFKBIAP25963 317 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 TNFSF8P32971 234 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 RYKP34925 604 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 GNAQP50148 359 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 PRAMEP78395 509 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 SRSF1Q07955 248 aaKnown RBP eCLIP5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 RUNX2Q13950 521 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 SHBQ15464 509 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 EZH2Q15910 746 aaKnown RBP5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 SUPT20HL1Q3ZLR7 823 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 PLEKHO1Q53GL0 409 aaPredicted RBP5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 FAM205BPQ63HN1 556 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 SYCE2Q6PIF2 218 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 SARM1Q6SZW1 724 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 CCDC129Q6ZRS4 1044 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 CADM3Q8N126 398 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 CNTROBQ8N137 903 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 PDILTQ8N807 584 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 KDM1BQ8NB78 822 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 TMEM163Q8TC26 289 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 KCNG4Q8TDN1 519 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 ATOH1Q92858 354 aaPredicted RBP5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 ARHGEF2Q92974 986 aaKnown RBP5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 EME1Q96AY2 570 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 COQ8BQ96D53 544 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 BARD1Q99728 777 aaKnown RBP5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 SDF4Q9BRK5 362 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 ITPAQ9BY32 194 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 B3GNT4Q9C0J1 378 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 CDT1Q9H211 546 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 CCDC68Q9H2F9 335 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 AAMDCQ9H7C9 122 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 FZD3Q9NPG1 666 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 TMEM184CQ9NVA4 438 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 PTGFRNQ9P2B2 879 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 SLCO3A1Q9UIG8 710 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 HAO1Q9UJM8 370 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 GPR34Q9UPC5 381 aa5.31□□□□□ -1.56
GAPVD1-211ENST00000467707 A0A0G2JK05 382 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 TYW5A2RUC4 315 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 PRSS47A8MTI9 375 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 MASP2O00187 686 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 HSPB6O14558 160 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 MDM4O15151 490 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 BCAT2O15382 392 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 DOK2O60496 412 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 PAGE4O60829 102 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 MT-CYBP00156 380 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 IFNA2P01563 188 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 EIF2S1P05198 315 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 PRR35P0CG20 571 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 CDAP32320 146 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 ICAM3P32942 547 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 ALDH7A1P49419 539 aaKnown RBP5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 EFNA5P52803 228 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 GAD2Q05329 585 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 TMEM115Q12893 351 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 PPP2R5BQ15173 497 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 INPP5JQ15735 1006 aaPredicted RBP5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 TMEM154Q6P9G4 183 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 TRAPPC11Q7Z392 1133 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 DENND6AQ8IWF6 608 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 FAM217AQ8IXS0 508 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 KIAA2013Q8IYS2 634 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 FRMD1Q8N878 549 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 TMEM116Q8NCL8 245 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 RASSF8Q8NHQ8 419 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 SCFD2Q8WU76 684 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 HEMGNQ9BXL5 484 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 KLHL31Q9H511 634 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 SLITRK6Q9H5Y7 841 aa5.3□□□□□ -1.56
GAPVD1-211ENST00000467707 ASAH2Q9NR71 780 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms