RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 LOC101059948A0A1B0GTJ6 334 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 B4DGG1 531 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 O00370 1275 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 SMAD6O43541 496 aaKnown RBP10.4□□□□□ -0.74
HDAC3-203ENST00000467533 TSPAN6O43657 245 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 ENDOD1O94919 500 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 FBXO21O94952 628 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 FYNP06241 537 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 KRT13P13646 458 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 ABL2P42684 1182 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 MRPL49Q13405 166 aaKnown RBP10.4□□□□□ -0.74
HDAC3-203ENST00000467533 E2F4Q16254 413 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 C14orf28Q4W4Y0 310 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 PMF1Q6P1K2 205 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 CNNM4Q6P4Q7 775 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 DPY19L3Q6ZPD9 716 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 NRSN1Q8IZ57 195 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 UNC5BQ8IZJ1 945 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 NLGN4XQ8N0W4 816 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 NLGN4YQ8NFZ3 816 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-203ENST00000467533 ASB12Q8WXK4 309 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 PRMT1Q99873 361 aaKnown RBP10.4□□□□□ -0.74
HDAC3-203ENST00000467533 C7orf25Q9BPX7 421 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 C2orf49Q9BVC5 232 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-203ENST00000467533 C1QTNF7Q9BXJ2 289 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 BLZF1Q9H2G9 400 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 TMEM8AQ9HCN3 771 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 SLC39A1Q9NY26 324 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 VPS51Q9UID3 782 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 SMC3Q9UQE7 1217 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 OR51B4Q9Y5P0 310 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 KCNMB2Q9Y691 235 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 SHANK1Q9Y566 2161 aa10.4□□□□□ -0.74
HDAC3-203ENST00000467533 TNRC6AQ8NDV7 1962 aaKnown RBP10.39□□□□□ -0.75
HDAC3-203ENST00000467533 ANKRD36A6QL64 1941 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 KCNU1A8MYU2 1149 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 M0QYV0 167 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 TOR1BO14657 336 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 RFPL1O75677 317 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 GABBR2O75899 941 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 LDLRP01130 860 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 RHOCP08134 193 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 VDRP11473 427 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 CSTF2P33240 577 aaKnown RBP eCLIP10.39□□□□□ -0.75
HDAC3-203ENST00000467533 IRAK1P51617 712 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 CLCN6P51797 869 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 DCAF12Q5T6F0 453 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 FBXL22Q6P050 247 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 ENPP7Q6UWV6 458 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 LINGO4Q6UY18 593 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 INTS8Q75QN2 995 aaKnown RBP10.39□□□□□ -0.75
HDAC3-203ENST00000467533 KDELC2Q7Z4H8 507 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 FAM129CQ86XR2 697 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 SEMA4DQ92854 862 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 MARVELD3Q96A59 401 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 CENPTQ96BT3 561 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 EEF2KMTQ96G04 330 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 TCTN2Q96GX1 697 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 FAXDC2Q96IV6 333 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 PSMB7Q99436 277 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 NUDT22Q9BRQ3 303 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 SLC29A3Q9BZD2 475 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 ASPSCR1Q9BZE9 553 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 ZDHHC6Q9H6R6 413 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 MBNL1Q9NR56 388 aaKnown RBP10.39□□□□□ -0.75
HDAC3-203ENST00000467533 MAP10Q9P2G4 905 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 KLQ9UEF7 1012 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 VANGL2Q9ULK5 521 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 CELSR1Q9NYQ6 3014 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 PDZD2O15018 2839 aa10.39□□□□□ -0.75
HDAC3-203ENST00000467533 RP1L1Q8IWN7 2480 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-203ENST00000467533 SYNJ2BP-COX16A0A087WUM0 186 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 IGHV5-10-1A0A0J9YXX1 117 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 ARHGAP10A1A4S6 786 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 NUDT21O43809 227 aaKnown RBP10.38□□□□□ -0.75
HDAC3-203ENST00000467533 MAP4P27816 1152 aaKnown RBP10.38□□□□□ -0.75
HDAC3-203ENST00000467533 HTR1BP28222 390 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 GGCXP38435 758 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 DNA2P51530 1060 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 CCNHP51946 323 aaPredicted RBP10.38□□□□□ -0.75
HDAC3-203ENST00000467533 YWHAEP62258 255 aaKnown RBP10.38□□□□□ -0.75
HDAC3-203ENST00000467533 HLTFQ14527 1009 aaKnown RBP eCLIP10.38□□□□□ -0.75
HDAC3-203ENST00000467533 EDRF1Q3B7T1 1238 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 SYPL2Q5VXT5 272 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 ANKS6Q68DC2 871 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 KRT39Q6A163 491 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 TIPARPQ7Z3E1 657 aaKnown RBP10.38□□□□□ -0.75
HDAC3-203ENST00000467533 TAF8Q7Z7C8 310 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 SFTPA2Q8IWL1 248 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 SLC34A3Q8N130 599 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 AGBL5Q8NDL9 886 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 FAM46DQ8NEK8 389 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 SLC35F5Q8WV83 523 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 RAB7BQ96AH8 199 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 HEPHQ9BQS7 1158 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 ZMYND15Q9H091 742 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 KCTD10Q9H3F6 313 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 FAM204AQ9H8W3 233 aa10.38□□□□□ -0.75
HDAC3-203ENST00000467533 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.38□□□□□ -0.75
HDAC3-203ENST00000467533 COX16Q9P0S2 106 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms