RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 RNF225M0QZC1 329 aaPredicted RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 TNFRSF10CO14798 259 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 F9P00740 461 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 KRT16P08779 473 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 KRT3P12035 628 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CHN1P15882 459 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CTRB1P17538 263 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 RFX5P48382 616 aaPredicted RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 SLC11A1P49279 550 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 KIF23Q02241 960 aaPredicted RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CSTF3Q12996 717 aaKnown RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 RGS21Q2M5E4 152 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 SMTNL2Q2TAL5 461 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 UAP1L1Q3KQV9 507 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 SFRP5Q5T4F7 317 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CACHD1Q5VU97 1274 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CTRB2Q6GPI1 263 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 TMEM270Q6UE05 265 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 ZNF365Q70YC5 407 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CPLX4Q7Z7G2 160 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 LRRC6Q86X45 466 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 LINC00346Q8IVM7 164 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 DDIASQ8IXT1 998 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 ANKFN1Q8N957 763 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 GAL3ST3Q96A11 431 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 PHF21BQ96EK2 531 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 PTPN18Q99952 460 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CCDC28BQ9BUN5 200 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 SLC26A1Q9H2B4 701 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 MKNK2Q9HBH9 465 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 PI4KBQ9UBF8 816 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 PAIP2BQ9ULR5 123 aaKnown RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 TTC7AQ9ULT0 858 aaPredicted RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 C4AP0C0L4 1744 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 C4BP0C0L5 1744 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 ARHGAP23Q9P227 1491 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 A0A1W2PN81 502 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 ATP2A1O14983 1001 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 GMFGO60234 142 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 PRDM1O75626 825 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 RHBDL1O75783 438 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 OAS1P00973 400 aaKnown RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 ERVK-10P10266 1014 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 ITGB8P26012 769 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CHRNA7P36544 502 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 FMO1Q01740 532 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 ZNF177Q13360 481 aaPredicted RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 RIPPLY2Q5TAB7 128 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 DAB2IPQ5VWQ8 1189 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 MARCH10Q8NA82 808 aaPredicted RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 IL31RAQ8NI17 732 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 SLC22A17Q8WUG5 538 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 AFG1LQ8WV93 481 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 GRAMD1AQ96CP6 724 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 ATG4CQ96DT6 458 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 TMA16Q96EY4 203 aaKnown RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 C14orf79Q96F83 325 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CCDC134Q9H6E4 229 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 HSFX1Q9UBD0 423 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 UXTQ9UBK9 157 aaPredicted RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 TBC1D30Q9Y2I9 924 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 MYH2Q9UKX2 1941 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 MROH7Q68CQ1 1323 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 MYH7BA7E2Y1 1941 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 A8MUI8 341 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 IGF2BP3O00425 579 aaKnown RBP eCLIP7.78□□□□□ -1.163e-7■■■■■ 36.8
SPTBN1-204ENST00000467371 ZNF213O14771 459 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CSF2P04141 144 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 TK1P04183 234 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CFHP08603 1231 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 NAGAP17050 411 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CALB2P22676 271 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 NR2F2P24468 414 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 EDNRBP24530 442 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 RAB1AP62820 205 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 PRAMEP78395 509 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 ATP11AP98196 1134 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 HERC4Q5GLZ8 1057 aaPredicted RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 OVOS1Q6IE37 1185 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 VPS36Q86VN1 386 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 PYROXD2Q8N2H3 581 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 POGLUT1Q8NBL1 392 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 KCNE4Q8WWG9 221 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 OR1F2PQ96R84 312 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 OSMRQ99650 979 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 AIFM2Q9BRQ8 373 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 RAB17Q9H0T7 212 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 CNOT10Q9H9A5 744 aaKnown RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 RBM12Q9NTZ6 932 aaKnown RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 OXSMQ9NWU1 459 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 DLGAP2Q9P1A6 1054 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 LARSQ9P2J5 1176 aaKnown RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 STX18Q9P2W9 335 aaKnown RBP7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 SLC7A8Q9UHI5 535 aa7.78□□□□□ -1.16
SPTBN1-204ENST00000467371 PCDH11XQ9BZA7 1347 aa7.77□□□□□ -1.16
SPTBN1-204ENST00000467371 PCDH11YQ9BZA8 1340 aa7.77□□□□□ -1.16
SPTBN1-204ENST00000467371 MST1RQ04912 1400 aa7.77□□□□□ -1.16
SPTBN1-204ENST00000467371 LTN1O94822 1766 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms