RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 PPP1R2P1Q96PQ5 205 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 ACE2Q9BYF1 805 aaPredicted RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 EBF2Q9HAK2 575 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.56□□□□□ -0.56
HPS1-208ENST00000467246 PCDHB12Q9Y5F1 795 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 CDY1Q9Y6F8 540 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 DOCK4Q8N1I0 1966 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 FAM95CA0A1B0GW59 222 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 DRGXA6NNA5 263 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 TRIM13O60858 407 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 RPL17P18621 184 aaKnown RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 OR1E1P30953 314 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 HADHAP40939 763 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 THOC5Q13769 683 aaKnown RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 POLD3Q15054 466 aaPredicted RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 RABGAP1LQ5R372 815 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 TRIM68Q6AZZ1 485 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 CFAP52Q8N1V2 620 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 SH3TC2Q8TF17 1288 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 SEPT8Q92599 483 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 MCUR1Q96AQ8 359 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 SPATA17Q96L03 361 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 NUDCD1Q96RS6 583 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 SIKE1Q9BRV8 207 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 GATA5Q9BWX5 397 aaPredicted RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 CFHR5Q9BXR6 569 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 ARNT2Q9HBZ2 717 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 MRM3Q9HC36 420 aaKnown RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 OLA1Q9NTK5 396 aaKnown RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 OXSMQ9NWU1 459 aa11.56□□□□□ -0.56
HPS1-208ENST00000467246 APOBEC2Q9Y235 224 aaKnown RBP11.56□□□□□ -0.56
HPS1-208ENST00000467246 MAP3K13O43283 966 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 RAMP2O60895 175 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 HSPA4LO95757 839 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 CHRNGP07510 517 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 CCR10P46092 362 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 SERPINH1P50454 418 aaKnown RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 MSLNQ13421 630 aaPredicted RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 UGP2Q16851 508 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 ZNF789Q5FWF6 425 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 WASHC2DQ5SRD0 308 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 KIAA0930Q6ICG6 404 aaPredicted RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 NEPROQ6NW34 567 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 NPAS4Q8IUM7 802 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 FSTL5Q8N475 847 aaPredicted RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 RBM15BQ8NDT2 890 aaKnown RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 TTPALQ9BTX7 342 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 RNPEPL1Q9HAU8 725 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 ATP13A1Q9HD20 1204 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 TAGLN3Q9UI15 199 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 FBXO5Q9UKT4 447 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 MKI67P46013 3256 aaKnown RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 H0Y3Z8 333 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 CCL22O00626 93 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 PQBP1O60828 265 aaKnown RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 PAMP19021 973 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 TAS2R39P59534 338 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 RAB10P61026 200 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 DLG1Q12959 904 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 SLC12A1Q13621 1099 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 KHDC1Q4VXA5 237 aaKnown RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 CNSTQ6PJW8 725 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 TEX26Q8N6G2 289 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 C2CD4AQ8NCU7 369 aaPredicted RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 SLAIN1Q8ND83 568 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 ARRDC2Q8TBH0 407 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 NXNL1Q96CM4 212 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 SCYL1Q96KG9 808 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 MAN1C1Q9NR34 630 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 NOP53Q9NZM5 478 aaKnown RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 UXTQ9UBK9 157 aaPredicted RBP11.55□□□□□ -0.56
HPS1-208ENST00000467246 ANKRD6Q9Y2G4 727 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 ACOT9Q9Y305 439 aa11.55□□□□□ -0.56
HPS1-208ENST00000467246 SLC38A8A6NNN8 435 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 SIN3BO75182 1162 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 ZDHHC11BP0C7U3 371 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 ALOX15P16050 662 aaPredicted RBP11.54□□□□□ -0.56
HPS1-208ENST00000467246 STMN1P16949 149 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 PGM1P36871 562 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 CCL23P55773 120 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 SERINC3Q13530 473 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 SNX30Q5VWJ9 437 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 ZYG11AQ6WRX3 759 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 ANKS3Q6ZW76 656 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
HPS1-208ENST00000467246 WDR60Q8WVS4 1066 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 RSRC1Q96IZ7 334 aaKnown RBP11.54□□□□□ -0.56
HPS1-208ENST00000467246 ELMO2Q96JJ3 720 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 GPR78Q96P69 363 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 NDNQ99608 321 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 UBE2OQ9C0C9 1292 aaKnown RBP11.54□□□□□ -0.56
HPS1-208ENST00000467246 COG4Q9H9E3 785 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 VPS45Q9NRW7 570 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 DNAJC28Q9NX36 388 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 FNDC1Q4ZHG4 1894 aaPredicted RBP11.54□□□□□ -0.56
HPS1-208ENST00000467246 A0A0D9SEW6 157 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 HEATR9A2RTY3 570 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 MUSKO15146 869 aa11.54□□□□□ -0.56
HPS1-208ENST00000467246 CD151P48509 253 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms