RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 C4orf22Q6V702 233 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 SPOCD1Q6ZMY3 1216 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 MAATS1Q7Z4T9 603 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 TFAP2DQ7Z6R9 452 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 DSG4Q86SJ6 1040 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 CDKL3Q8IVW4 592 aaPredicted RBP6.73□□□□□ -1.33
UBXN4-205ENST00000467065 ZCCHC9Q8N567 271 aaKnown RBP6.73□□□□□ -1.33
UBXN4-205ENST00000467065 CEP112Q8N8E3 955 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 RTL3Q8N8U3 475 aaKnown RBP6.73□□□□□ -1.33
UBXN4-205ENST00000467065 LRRC57Q8N9N7 239 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 ATP11CQ8NB49 1132 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 DEFB124Q8NES8 71 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 OR2T3Q8NH03 318 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 CCHCR1Q8TD31 782 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 TFB1MQ8WVM0 346 aaKnown RBP6.73□□□□□ -1.33
UBXN4-205ENST00000467065 CASKIN2Q8WXE0 1202 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 SNX19Q92543 992 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 MYO19Q96H55 970 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 ZNF419Q96HQ0 510 aaPredicted RBP6.73□□□□□ -1.33
UBXN4-205ENST00000467065 HES6Q96HZ4 224 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 MRGPRX3Q96LB0 322 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 CSPG4P5Q96PW8 444 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 RNF157Q96PX1 679 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 PSMB7Q99436 277 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 PRMT1Q99873 361 aaKnown RBP6.73□□□□□ -1.33
UBXN4-205ENST00000467065 TRIM7Q9C029 511 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 MIR1-1HGQ9H1L0 117 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 TMEM245Q9H330 911 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 CAPN10Q9HC96 672 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 PCDH18Q9HCL0 1135 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 PRSS16Q9NQE7 514 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 ITM2CQ9NQX7 267 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 DYRK4Q9NR20 520 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 GPATCH2LQ9NWQ4 482 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 WSB2Q9NYS7 404 aaPredicted RBP6.73□□□□□ -1.33
UBXN4-205ENST00000467065 MPP6Q9NZW5 540 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 CWC15Q9P013 229 aaKnown RBP6.73□□□□□ -1.33
UBXN4-205ENST00000467065 SEPT10Q9P0V9 454 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 SNX12Q9UMY4 172 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 SLC6A14Q9UN76 642 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 PLXNB3Q9ULL4 1909 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 ASPMQ8IZT6 3477 aa6.73□□□□□ -1.33
UBXN4-205ENST00000467065 LRRK1Q38SD2 2015 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 IGF2RP11717 2491 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 CFAP69A5D8W1 941 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 TTC34A8MYJ7 566 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 HACD1B0YJ81 288 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 SIN3BO75182 1162 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 IGLV3-19P01714 112 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 XPAP23025 273 aaPredicted RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 AMPD1P23109 780 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 ACSL1P33121 698 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 STK19P49842 368 aaPredicted RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 TAS2R40P59535 323 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 EIF3EP60228 445 aaKnown RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 RPS14P62263 151 aaKnown RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 SARNPP82979 210 aaKnown RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 ECT2LQ008S8 904 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 SLC25A11Q02978 314 aaKnown RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 GNA12Q03113 381 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 GRIK2Q13002 908 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 ZNF211Q13398 564 aaPredicted RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 XRCC4Q13426 336 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 EIF4EBP2Q13542 120 aaPredicted RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 DPYSL3Q14195 570 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 ZNF235Q14590 738 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 RFTN1Q14699 578 aaPredicted RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 GRM3Q14832 879 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 PPP1R7Q15435 360 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 WDR45BQ5MNZ6 344 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 SYCP2LQ5T4T6 812 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 SWT1Q5T5J6 900 aaKnown RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 MARC1Q5VT66 337 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 RABEPKQ7Z6M1 372 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 APCDD1Q8J025 514 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 PYROXD2Q8N2H3 581 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 MINDY1Q8N5J2 469 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 CEP76Q8TAP6 659 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 RAPGEF5Q92565 580 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 MAGOHBQ96A72 148 aaKnown RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 TTC17Q96AE7 1141 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 CAPZA3Q96KX2 299 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 RPL10LQ96L21 214 aaKnown RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 KCTD15Q96SI1 283 aaPredicted RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 OSBPL9Q96SU4 736 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 VAT1Q99536 393 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 CINPQ9BW66 212 aaPredicted RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 GOLPH3Q9H4A6 298 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 C6orf106Q9H6K1 298 aaPredicted RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 KLHL11Q9NVR0 708 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 TMEM248Q9NWD8 314 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 EIF2B4Q9UI10 523 aaKnown RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 PACSIN2Q9UNF0 486 aaPredicted RBP6.72□□□□□ -1.33
UBXN4-205ENST00000467065 ERVW-1Q9UQF0 538 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 TTLL3Q9Y4R7 772 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 SLCO1B1Q9Y6L6 691 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 CAPN6Q9Y6Q1 641 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 TRPM6Q9BX84 2022 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 MYLKQ15746 1914 aa6.72□□□□□ -1.33
UBXN4-205ENST00000467065 SHROOM3Q8TF72 1996 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms