RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 CCP110O43303 1012 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 BUB1O43683 1085 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 NEBLO76041 1014 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 MT-CO3P00414 261 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 CSF2P04141 144 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 MYF5P13349 255 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 EIF2S3P41091 472 aaKnown RBP19.44■□□□□ 0.7
COL9A3-206ENST00000466532 MYL5Q02045 173 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 UBXN1Q04323 297 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 PDE1CQ14123 709 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-206ENST00000466532 MYLK3Q32MK0 819 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 EFHC2Q5JST6 749 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 ATXN7L2Q5T6C5 722 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-206ENST00000466532 SCYL2Q6P3W7 929 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 SASS6Q6UVJ0 657 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 LRRC69Q6ZNQ3 347 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 MON1BQ7L1V2 547 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 RTL3Q8N8U3 475 aaKnown RBP19.44■□□□□ 0.7
COL9A3-206ENST00000466532 ZNF548Q8NEK5 533 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-206ENST00000466532 VOPP1Q96AW1 172 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 ARHGEF26Q96DR7 871 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 GDAP1L1Q96MZ0 367 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 DUSP23Q9BVJ7 150 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 LRP4O75096 1905 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 ASXL3Q9C0F0 2248 aa19.44■□□□□ 0.7
COL9A3-206ENST00000466532 ANKRD62A6NC57 917 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 K7ESM1 405 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 SPINT1O43278 529 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 BRINP1O60477 761 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 TMCC1O94876 653 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 NME1P15531 152 aaKnown RBP19.43■□□□□ 0.7
COL9A3-206ENST00000466532 ITPKBP27987 946 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 EPHB2P29323 1055 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 DNAJC24Q6P3W2 148 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 GDPD4Q6W3E5 623 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 DENND6BQ8NEG7 585 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 ASB12Q8WXK4 309 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 AGPAT1Q99943 283 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 NOL6Q9H6R4 1146 aaKnown RBP19.43■□□□□ 0.7
COL9A3-206ENST00000466532 EVA1BQ9NVM1 165 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 ANO10Q9NW15 660 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 RP1P56715 2156 aa19.43■□□□□ 0.7
COL9A3-206ENST00000466532 TCRBV5S1A1TA0A578 114 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 RRP8O43159 456 aaKnown RBP19.42■□□□□ 0.7
COL9A3-206ENST00000466532 CREB3O43889 395 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 OPA1O60313 960 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 IGSF6O95976 241 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 CDK11BP21127 795 aaKnown RBP19.42■□□□□ 0.7
COL9A3-206ENST00000466532 DUSP3P51452 185 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-206ENST00000466532 ZNF143P52747 638 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-206ENST00000466532 RHOAP61586 193 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 RAD51Q06609 339 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 C1QBPQ07021 282 aaKnown RBP19.42■□□□□ 0.7
COL9A3-206ENST00000466532 ACAP1Q15027 740 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 STX1AQ16623 288 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 LRRC73Q5JTD7 316 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 TPRG1LQ5T0D9 272 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 TTC7BQ86TV6 843 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 FAM181AQ8N9Y4 354 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 CASKIN2Q8WXE0 1202 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 BAP1Q92560 729 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 MCEEQ96PE7 176 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 ERGIC2Q96RQ1 377 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 EPAS1Q99814 870 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 TTYH3Q9C0H2 523 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 KLC2Q9H0B6 622 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 USP29Q9HBJ7 922 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 KLF15Q9UIH9 416 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 PCDHB1Q9Y5F3 818 aa19.42■□□□□ 0.7
COL9A3-206ENST00000466532 LY6G6EA0A0G2JKS1 128 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 AREL1O15033 823 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 GP1BAP07359 652 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 JUNDP17535 347 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 YBEYP58557 167 aaPredicted RBP19.41■□□□□ 0.7
COL9A3-206ENST00000466532 PFN3P60673 137 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 RPL7AP62424 266 aaKnown RBP19.41■□□□□ 0.7
COL9A3-206ENST00000466532 INO80DQ53TQ3 878 aaPredicted RBP19.41■□□□□ 0.7
COL9A3-206ENST00000466532 CDCP2Q5VXM1 449 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 ZCCHC8Q6NZY4 707 aaKnown RBP19.41■□□□□ 0.7
COL9A3-206ENST00000466532 NETO2Q8NC67 525 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 SNIP1Q8TAD8 396 aaKnown RBP19.41■□□□□ 0.7
COL9A3-206ENST00000466532 FGF11Q92914 225 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 HMCESQ96FZ2 354 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 BBC3Q96PG8 261 aaPredicted RBP19.41■□□□□ 0.7
COL9A3-206ENST00000466532 CATSPERBQ9H7T0 1116 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 FZD10Q9ULW2 581 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 CSNK1G3Q9Y6M4 447 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 U3KQA8 63 aa19.41■□□□□ 0.7
COL9A3-206ENST00000466532 RASA4BC9J798 803 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 AQP9O43315 295 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 RASA4O43374 803 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 MMP20O60882 483 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 ACTN2P35609 894 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 ANP32AP39687 249 aaKnown RBP19.4■□□□□ 0.7
COL9A3-206ENST00000466532 THOP1P52888 689 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 AIF1P55008 147 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 EIF2B5Q13144 721 aaKnown RBP19.4■□□□□ 0.7
COL9A3-206ENST00000466532 DCUN1D2Q6PH85 259 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 VPS36Q86VN1 386 aa19.4■□□□□ 0.7
COL9A3-206ENST00000466532 IFI44Q8TCB0 444 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms