RNA–Protein interactions for RNA: ENST00000466382.2

ARID1A-206, Transcript of AT-rich interaction domain 1A, human

TSL 2

Gene ARID1A, Length 2,699 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-206	ENST00000466382	ENO4	A6NNW6	628 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	CCL22	O00626	93 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	GLRA3	O75311	464 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	PARN	O95453	639 aa	Known RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	TROVE2	P10155	538 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	ACR	P10323	421 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	FGF3	P11487	239 aa	Predicted RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	TARS	P26639	723 aa	Known RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	CCDC15	Q0P6D6	951 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	LRRC26	Q2I0M4	334 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	TAF1B	Q53T94	588 aa	Predicted RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	SNX30	Q5VWJ9	437 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	POTEH	Q6S545	545 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	GBP7	Q8N8V2	638 aa	Predicted RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	KLHL23	Q8NBE8	558 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	TRIM43	Q96BQ3	446 aa	Predicted RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	PRICKLE1	Q96MT3	831 aa	Predicted RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	TMEM120A	Q9BXJ8	343 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	RC3H2	Q9HBD1	1191 aa	Known RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	HEY2	Q9UBP5	337 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	SLC39A10	Q9ULF5	831 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	HBS1L	Q9Y450	684 aa	Known RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	BIRC5	O15392	142 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	STC2	O76061	302 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	TGDS	O95455	350 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	CBX6	O95503	412 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	MYL2	P10916	166 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	CSRP3	P50461	194 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	DSG1	Q02413	1049 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	IL10RB	Q08334	325 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	PLD1	Q13393	1074 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	SEPT6	Q14141	434 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	CTC1	Q2NKJ3	1217 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	HECTD3	Q5T447	861 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	PDPK2P	Q6A1A2	396 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	ASRGL1	Q7L266	308 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	TMEM150A	Q86TG1	271 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	ARID3B	Q8IVW6	561 aa	Predicted RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	FATE1	Q969F0	183 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	PAWR	Q96IZ0	340 aa	Known RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	TMEM237	Q96Q45	408 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	SLC22A12	Q96S37	553 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	ARNT2	Q9HBZ2	717 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	UXT	Q9UBK9	157 aa	Predicted RBP	12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	HAO1	Q9UJM8	370 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	KCTD3	Q9Y597	815 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382	MICAL3	Q7RTP6	2002 aa		12.5	□□□□□ -0.41
ARID1A-206	ENST00000466382		F5H5T6	163 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	AP3B1	O00203	1094 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	PHGDH	O43175	533 aa	Known RBP	12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	DNAJC6	O75061	913 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	UNC5C	O95185	931 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	IL1B	P01584	269 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	SERPINB3	P29508	390 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	ARFIP2	P53365	341 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	ZXDB	P98169	803 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	ZNF460	Q14592	562 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	LBR	Q14739	615 aa	Known RBP	12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	PARP15	Q460N3	678 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	C5orf22	Q49AR2	442 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	ZNF789	Q5FWF6	425 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	STXBP5	Q5T5C0	1151 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	C1orf53	Q5VUE5	145 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	CLEC14A	Q86T13	490 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	TTC7B	Q86TV6	843 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	TADA1	Q96BN2	335 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	C7orf26	Q96N11	449 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	SEMA3C	Q99985	751 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	PDF	Q9HBH1	243 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	ACSS2	Q9NR19	701 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	PAPOLB	Q9NRJ5	636 aa	Known RBP	12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	SMPD4	Q9NXE4	827 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	YIPF1	Q9Y548	306 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	KIAA0100	Q14667	2235 aa	Known RBP	12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	TSPAN3	O60637	253 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	PRAMEF11	O60813	436 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	CLTB	P09497	229 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	IRF1	P10914	325 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	HOXD9	P28356	352 aa	Predicted RBP	12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	AVPR1A	P37288	418 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	SERPINB8	P50452	374 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	STX3	Q13277	289 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	BTG3	Q14201	252 aa	Predicted RBP	12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	SETDB1	Q15047	1291 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	CLNK	Q7Z7G1	428 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	SPATA6L	Q8N4H0	392 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	TMEM151A	Q8N4L1	468 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	PPHLN1	Q8NEY8	458 aa	Known RBP	12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	TMEM169	Q96HH4	297 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	MYRFL	Q96LU7	910 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	TSC22D3	Q99576	134 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	COPG2	Q9UBF2	871 aa		12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	AGO1	Q9UL18	857 aa	Known RBP	12.49	□□□□□ -0.41
ARID1A-206	ENST00000466382	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	12.48	□□□□□ -0.41
ARID1A-206	ENST00000466382	DCTN3	O75935	186 aa		12.48	□□□□□ -0.41
ARID1A-206	ENST00000466382	HAUS5	O94927	633 aa		12.48	□□□□□ -0.41
ARID1A-206	ENST00000466382	ATXN1L	P0C7T5	689 aa	Known RBP	12.48	□□□□□ -0.41
ARID1A-206	ENST00000466382	CORO1A	P31146	461 aa	Known RBP	12.48	□□□□□ -0.41
ARID1A-206	ENST00000466382	SLC1A2	P43004	574 aa		12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms