RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 LRRC19Q9H756 370 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 EBF2Q9HAK2 575 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 CAPN10Q9HC96 672 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 TM9SF3Q9HD45 589 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 FZD3Q9NPG1 666 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 DONSONQ9NYP3 566 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 LHX3Q9UBR4 397 aa9.89□□□□□ -0.83
RTFDC1-205ENST00000466260 ASCC3Q8N3C0 2202 aaKnown RBP9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 CDX4O14627 284 aaPredicted RBP9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 KCNK3O14649 394 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 MFSD11O43934 449 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 PRAMEF11O60813 436 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 RNGTTO60942 597 aaKnown RBP9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 PALMO75781 387 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 GSRP00390 522 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 KRT1P04264 644 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 SYPP08247 313 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 PRLRP16471 622 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 SDHBP21912 280 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 CD27P26842 260 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 SERPINB6P35237 376 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 HOXD12P35452 270 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 ABL2P42684 1182 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 RGRP47804 291 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 NEK3P51956 506 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 IL9RQ01113 521 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 TUBB2AQ13885 445 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 DPYSL3Q14195 570 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 CYTH1Q15438 398 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 SPA17Q15506 151 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 ODF2Q5BJF6 829 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 FBXL19Q6PCT2 694 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 NYAP1Q6ZVC0 841 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 ERN2Q76MJ5 926 aaKnown RBP9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 ATPAF2Q8N5M1 289 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 TSEN2Q8NCE0 465 aaKnown RBP9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 TMIEQ8NEW7 156 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 LRRN4Q8WUT4 740 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 TEKT4Q8WW24 435 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 TUBB2BQ9BVA1 445 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 PCED1AQ9H1Q7 454 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 IL21RQ9HBE5 538 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 PDFQ9HBH1 243 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 DLL3Q9NYJ7 618 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 IPO11Q9UI26 975 aaKnown RBP9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 ITM2BQ9Y287 266 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 CA5BQ9Y2D0 317 aa9.88□□□□□ -0.83
RTFDC1-205ENST00000466260 DNAH14Q0VDD8 3507 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 FRYLO94915 3013 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 A0A1W2PPC4 97 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 A0A1W2PQU0 124 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 TTC24A2A3L6 582 aaPredicted RBP9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 LRRD1A4D1F6 860 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 C16orf96A6NNT2 1141 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 NEMP1O14524 444 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 WNT9AO14904 365 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 SLC31A1O15431 190 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 SLC7A4O43246 635 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 SPOPO43791 374 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 OPHN1O60890 802 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 GJB3O75712 270 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 KRT7P08729 469 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 ADRB3P13945 408 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 ITGB7P26010 798 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 AFF3P51826 1226 aaKnown RBP9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 ZNF135P52742 658 aaPredicted RBP9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 LIMK1P53667 647 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 NAP1L1P55209 391 aaKnown RBP9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 C21orf59P57076 290 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 TAS2R38P59533 333 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 CCZ1BP86790 482 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 CCZ1P86791 482 aaPredicted RBP9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 RAD51Q06609 339 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 ZNF235Q14590 738 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 LLGL1Q15334 1064 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 TEAD4Q15561 434 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 MYLK3Q32MK0 819 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 PPM1JQ5JR12 505 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 CFAP58Q5T655 872 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 SEL1L3Q68CR1 1132 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 NCBP2-AS2Q69YL0 99 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 GDPD4Q6W3E5 623 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 PRPF39Q86UA1 669 aaKnown RBP9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 ACRBPQ8NEB7 543 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 DEFB124Q8NES8 71 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 CASKIN2Q8WXE0 1202 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 ISG20Q96AZ6 181 aaKnown RBP9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 SERAC1Q96JX3 654 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 C16orf45Q96MC5 204 aaPredicted RBP9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 HS3ST6Q96QI5 342 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 GAREM1Q9H706 876 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 GGT7Q9UJ14 662 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 TTLL3Q9Y4R7 772 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 PCDHA13Q9Y5I0 950 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 SNX11Q9Y5W9 270 aa9.87□□□□□ -0.83
RTFDC1-205ENST00000466260 NDUFA10O95299 355 aa9.86□□□□□ -0.83
RTFDC1-205ENST00000466260 IPO7O95373 1038 aaKnown RBP9.86□□□□□ -0.83
RTFDC1-205ENST00000466260 POP4O95707 220 aaKnown RBP9.86□□□□□ -0.83
RTFDC1-205ENST00000466260 WNT1P04628 370 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms