RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 BBS2Q9BXC9 721 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 PIH1D1Q9NWS0 290 aaKnown RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 ZMYM5Q9UJ78 669 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 OR51B4Q9Y5P0 310 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 PRAMEF11O60813 436 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 DCTN3O75935 186 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 ARSAP15289 507 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 ALDH3A1P30838 453 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 GBP2P32456 591 aaPredicted RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 TNK2Q07912 1038 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 SF3A3Q12874 501 aaKnown RBP eCLIP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 FASTKD3Q14CZ7 662 aaKnown RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 MSS51Q4VC12 460 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 FNBP1LQ5T0N5 605 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 PDCD7Q8N8D1 485 aaKnown RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 LRRC8CQ8TDW0 803 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 ALG14Q96F25 216 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 RAB3IPQ96QF0 476 aaPredicted RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 FERMT1Q9BQL6 677 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 RPP25Q9BUL9 199 aaKnown RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 PDFQ9HBH1 243 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 DUS2Q9NX74 493 aaKnown RBP18.88■□□□□ 0.61
CAPN3-209ENST00000466222 MCM8Q9UJA3 840 aa18.88■□□□□ 0.61
CAPN3-209ENST00000466222 MUSKO15146 869 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 TYROBPO43914 113 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 TYRP14679 529 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 HLA-FP30511 346 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 ZNF33AQ06730 810 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 LMAN2Q12907 356 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 COL19A1Q14993 1142 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 PARM1Q6UWI2 310 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 LRRC49Q8IUZ0 686 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 PGBD5Q8N414 524 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 SMRP1Q8NCR6 262 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 BPIFB1Q8TDL5 484 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 PYROXD1Q8WU10 500 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 MYLIPQ8WY64 445 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 FGF14Q92915 247 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 RMDN2Q96LZ7 410 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 DHRS4Q9BTZ2 278 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 ACE2Q9BYF1 805 aaPredicted RBP18.87■□□□□ 0.61
CAPN3-209ENST00000466222 EBF3Q9H4W6 596 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 ACSS3Q9H6R3 686 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 NT5MQ9NPB1 228 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 VPS28Q9UK41 221 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 PHTF1Q9UMS5 762 aa18.87■□□□□ 0.61
CAPN3-209ENST00000466222 EDF1O60869 148 aaKnown RBP18.86■□□□□ 0.61
CAPN3-209ENST00000466222 USP12O75317 370 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 UNC5CO95185 931 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 MT-CYBP00156 380 aaPredicted RBP18.86■□□□□ 0.61
CAPN3-209ENST00000466222 PENKP01210 267 aaPredicted RBP18.86■□□□□ 0.61
CAPN3-209ENST00000466222 TCF3P15923 654 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 CA4P22748 312 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 WEE1P30291 646 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 ARF5P84085 180 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 IL10RBQ08334 325 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 CBLBQ13191 982 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 IHHQ14623 411 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 PARP6Q2NL67 630 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 MPP7Q5T2T1 576 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 MARC1Q5VT66 337 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 TIGD7Q6NT04 549 aaPredicted RBP18.86■□□□□ 0.61
CAPN3-209ENST00000466222 ADGRD1Q6QNK2 874 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 VITQ6UXI7 678 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 TTC8Q8TAM2 541 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 ZNF398Q8TD17 642 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 OSCP1Q8WVF1 389 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 OXNAD1Q96HP4 312 aaPredicted RBP18.86■□□□□ 0.61
CAPN3-209ENST00000466222 MYCBPQ99417 103 aaPredicted RBP18.86■□□□□ 0.61
CAPN3-209ENST00000466222 PAIP2Q9BPZ3 127 aaKnown RBP18.86■□□□□ 0.61
CAPN3-209ENST00000466222 KXD1Q9BQD3 176 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 MLPHQ9BV36 600 aaPredicted RBP18.86■□□□□ 0.61
CAPN3-209ENST00000466222 ABCB8Q9NUT2 735 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 TBC1D14Q9P2M4 693 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 RABGEF1Q9UJ41 708 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 INTS6Q9UL03 887 aaKnown RBP18.86■□□□□ 0.61
CAPN3-209ENST00000466222 MTSS1O43312 755 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 KDELR3O43731 214 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 SPAG7O75391 227 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 WFS1O76024 890 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 CD160O95971 181 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 MT-CO1P00395 513 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 CYBBP04839 570 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 OXCT1P55809 520 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 KCNJ2P63252 427 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 SEMA5AQ13591 1074 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 HNRNPDQ14103 355 aaKnown RBP18.86■□□□□ 0.61
CAPN3-209ENST00000466222 GRM2Q14416 872 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 DHCR24Q15392 516 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 EML3Q32P44 896 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 HHATQ5VTY9 493 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 RNF135Q8IUD6 432 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 GIMAP7Q8NHV1 300 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 GAS2L1Q99501 681 aaPredicted RBP18.86■□□□□ 0.61
CAPN3-209ENST00000466222 GBA3Q9H227 469 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 RETREG1Q9H6L5 497 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 KIF9Q9HAQ2 790 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 IGSF9Q9P2J2 1179 aa18.86■□□□□ 0.61
CAPN3-209ENST00000466222 TRHDEQ9UKU6 1024 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms