RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 MSLNQ13421 630 aaPredicted RBP18.47■□□□□ 0.55
COL9A3-205ENST00000466192 TXNDC8Q6A555 127 aa18.47■□□□□ 0.55
COL9A3-205ENST00000466192 ITIH5Q86UX2 942 aa18.47■□□□□ 0.55
COL9A3-205ENST00000466192 ISL2Q96A47 359 aa18.47■□□□□ 0.55
COL9A3-205ENST00000466192 POLR1EQ9GZS1 481 aaKnown RBP18.47■□□□□ 0.55
COL9A3-205ENST00000466192 CAB39LQ9H9S4 337 aa18.47■□□□□ 0.55
COL9A3-205ENST00000466192 TREX1Q9NSU2 369 aa18.47■□□□□ 0.55
COL9A3-205ENST00000466192 TRIM33Q9UPN9 1127 aa18.47■□□□□ 0.55
COL9A3-205ENST00000466192 MTO1Q9Y2Z2 717 aaKnown RBP18.47■□□□□ 0.55
COL9A3-205ENST00000466192 BIRC5O15392 142 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 VAPBO95292 243 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 GSRP00390 522 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 DLDP09622 509 aaKnown RBP18.46■□□□□ 0.55
COL9A3-205ENST00000466192 MAGEA12P43365 314 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 CREMQ03060 361 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 SEPT6Q14141 434 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 ZNF235Q14590 738 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 CNGA3Q16281 694 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 FASTKD1Q53R41 847 aaKnown RBP18.46■□□□□ 0.55
COL9A3-205ENST00000466192 MTDHQ86UE4 582 aaKnown RBP18.46■□□□□ 0.55
COL9A3-205ENST00000466192 KIF2BQ8N4N8 673 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 ARL14EPQ8N8R7 260 aaPredicted RBP18.46■□□□□ 0.55
COL9A3-205ENST00000466192 ADAMTS19Q8TE59 1207 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 CLP1Q92989 425 aaKnown RBP18.46■□□□□ 0.55
COL9A3-205ENST00000466192 KLHL29Q96CT2 875 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 ZNF599Q96NL3 588 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 SPON2Q9BUD6 331 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 KCNK13Q9HB14 408 aa18.46■□□□□ 0.55
COL9A3-205ENST00000466192 A0A1B0GVM2 712 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 TCAF2A6NFQ2 919 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 C2orf71A6NGG8 1288 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 PLIN3O60664 434 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 UNC5CO95185 931 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 IL1BP01584 269 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 SERPINB8P50452 374 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 SERPINH1P50454 418 aaKnown RBP18.45■□□□□ 0.54
COL9A3-205ENST00000466192 ARFIP2P53365 341 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 CSE1LP55060 971 aaKnown RBP18.45■□□□□ 0.54
COL9A3-205ENST00000466192 KCNJ2P63252 427 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 TAF1BQ53T94 588 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-205ENST00000466192 STXBP5Q5T5C0 1151 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 CHST9Q7L1S5 443 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 ACVR1CQ8NER5 493 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 BADQ92934 168 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 ZBED2Q9BTP6 218 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 TMEM120AQ9BXJ8 343 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 C20orf27Q9GZN8 174 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 ZNF358Q9NW07 568 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 STOML2Q9UJZ1 356 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 NUMBLQ9Y6R0 609 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 LAMA3Q16787 3333 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-205ENST00000466192 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-205ENST00000466192 ILVBLA1L0T0 632 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 KDELR3O43731 214 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 GREM1O60565 184 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 CXCL14O95715 111 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 OLFM2O95897 454 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 RHOCP08134 193 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 KCNA4P22459 653 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 HNRNPH1P31943 449 aaKnown RBP18.45■□□□□ 0.54
COL9A3-205ENST00000466192 ZNF177Q13360 481 aaPredicted RBP18.45■□□□□ 0.54
COL9A3-205ENST00000466192 DLG2Q15700 870 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 SIRPB2Q5JXA9 342 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 CYB5D1Q6P9G0 228 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 LILRA6Q6PI73 481 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 GAREM2Q75VX8 874 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 VPS39Q96JC1 886 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 C7orf26Q96N11 449 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 KLC4Q9NSK0 619 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 TMEM216Q9P0N5 145 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 STK39Q9UEW8 545 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 ZFP69BQ9UJL9 534 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 TBC1D30Q9Y2I9 924 aa18.45■□□□□ 0.54
COL9A3-205ENST00000466192 CHD7Q9P2D1 2997 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 LOC285095A0A1B0GVY8 99 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 ATXN1LP0C7T5 689 aaKnown RBP18.44■□□□□ 0.54
COL9A3-205ENST00000466192 KITP10721 976 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 HDCP19113 662 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 TARSP26639 723 aaKnown RBP18.44■□□□□ 0.54
COL9A3-205ENST00000466192 GABRB3P28472 473 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 GABRR2P28476 465 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 OXCT1P55809 520 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 OCRLQ01968 901 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 PABPC1LQ4VXU2 614 aaKnown RBP18.44■□□□□ 0.54
COL9A3-205ENST00000466192 CXorf57Q6NSI4 855 aaKnown RBP18.44■□□□□ 0.54
COL9A3-205ENST00000466192 CCDC91Q7Z6B0 441 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 HERC6Q8IVU3 1022 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 CNTN4Q8IWV2 1026 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 HS6ST3Q8IZP7 471 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 PPP1R14CQ8TAE6 165 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 HEY2Q9UBP5 337 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 SSX2IPQ9Y2D8 614 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 INSL6Q9Y581 213 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 CFAP73A6NFT4 308 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 TIMM44O43615 452 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 PRKCGP05129 697 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 MYL2P10916 166 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 CYP4F8P98187 520 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 STX3Q13277 289 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms