RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 CSHL1Q14406 222 aa9.55□□□□□ -0.88
SCAF11-205ENST00000465950 CRY1Q16526 586 aa9.55□□□□□ -0.88
SCAF11-205ENST00000465950 PDPK2PQ6A1A2 396 aa9.55□□□□□ -0.88
SCAF11-205ENST00000465950 ENPP7Q6UWV6 458 aa9.55□□□□□ -0.88
SCAF11-205ENST00000465950 FAM46DQ8NEK8 389 aa9.55□□□□□ -0.88
SCAF11-205ENST00000465950 OR2T3Q8NH03 318 aa9.55□□□□□ -0.88
SCAF11-205ENST00000465950 TBCDQ9BTW9 1192 aa9.55□□□□□ -0.88
SCAF11-205ENST00000465950 NENFQ9UMX5 172 aa9.55□□□□□ -0.88
SCAF11-205ENST00000465950 GFRA2O00451 464 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 CDK14O94921 469 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 DLDP09622 509 aaKnown RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 STMN1P16949 149 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 FOXR2Q6PJQ5 311 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 RUBCNQ92622 972 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 TRPC5OSA6NMA1 111 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 HOXA9P31269 272 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 ACTR1BP42025 376 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 LILRA4P59901 499 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 TMPRSS15P98073 1019 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 ZNF200P98182 395 aaPredicted RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 TTC23Q5W5X9 447 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 ZNF614Q8N883 585 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 DIS3LQ8TF46 1054 aaKnown RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 NUS1Q96E22 293 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 MED8Q96G25 268 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 MYOCQ99972 504 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 BRINP2Q9C0B6 783 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 TMEM9BQ9NQ34 198 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 KBTBD4Q9NVX7 518 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 TSR3Q9UJK0 312 aaKnown RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 ANGPT2O15123 496 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 CRABP2P29373 138 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 SHHQ15465 462 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 CAPN13Q6MZZ7 669 aaPredicted RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 GPIHBP1Q8IV16 184 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 PCYOX1LQ8NBM8 494 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 AZIN2Q96A70 460 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 CMKLR1Q99788 373 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 KCNH6Q9H252 994 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 POLR1BQ9H9Y6 1135 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 USP29Q9HBJ7 922 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 CATSPERZQ9NTU4 200 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 RBM12Q9NTZ6 932 aaKnown RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 KCNK4Q9NYG8 393 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 AMACRQ9UHK6 382 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 PADI4Q9UM07 663 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 DYTNA2CJ06 578 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 TOR1BO14657 336 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 EIF3HO15372 352 aaKnown RBP eCLIP9.54□□□□□ -0.881e-8■■■□□ 15.2
SCAF11-205ENST00000465950 E2F6O75461 281 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 FTCDO95954 541 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 BUD31P41223 144 aaPredicted RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 DSG1Q02413 1049 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 GUCY2DQ02846 1103 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 ARID3BQ8IVW6 561 aaPredicted RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 CMTM8Q8IZV2 173 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 MGARPQ8TDB4 240 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 RSRC1Q96IZ7 334 aaKnown RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 WDR92Q96MX6 357 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 SPATA9Q9BWV2 254 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 CAPN10Q9HC96 672 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 EPHA6Q9UF33 1036 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 XPO7Q9UIA9 1087 aaKnown RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 RARRES3Q9UL19 164 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 SLC6A14Q9UN76 642 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 SMG5Q9UPR3 1016 aaKnown RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 TRIM49BA6NDI0 452 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 TIPRLO75663 272 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 UGT2B4P06133 528 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 ME2P23368 584 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 IFNGR2P38484 337 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 FOXK1P85037 733 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 GNA12Q03113 381 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 MEA1Q16626 185 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 LRRC26Q2I0M4 334 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 AMZ1Q400G9 498 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 CBWD6Q4V339 395 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 HABP4Q5JVS0 413 aaKnown RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 SLC39A11Q8N1S5 342 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 MRPL43Q8N983 215 aaKnown RBP9.54□□□□□ -0.88
SCAF11-205ENST00000465950 COG1Q8WTW3 980 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 CRELD1Q96HD1 420 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 TUBGCP5Q96RT8 1024 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 MPP6Q9NZW5 540 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 KIF17Q9P2E2 1029 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 ZNF780BQ9Y6R6 833 aa9.54□□□□□ -0.88
SCAF11-205ENST00000465950 C4AP0C0L4 1744 aa9.53□□□□□ -0.88
SCAF11-205ENST00000465950 MON2Q7Z3U7 1717 aa9.53□□□□□ -0.88
SCAF11-205ENST00000465950 TTC36A6NLP5 189 aa9.53□□□□□ -0.88
SCAF11-205ENST00000465950 SLC28A1O00337 649 aa9.53□□□□□ -0.88
SCAF11-205ENST00000465950 TLX3O43711 291 aaPredicted RBP9.53□□□□□ -0.88
SCAF11-205ENST00000465950 RNGTTO60942 597 aaKnown RBP9.53□□□□□ -0.88
SCAF11-205ENST00000465950 PROSCO94903 275 aa9.53□□□□□ -0.88
SCAF11-205ENST00000465950 NCF2P19878 526 aaPredicted RBP9.53□□□□□ -0.88
SCAF11-205ENST00000465950 CENPAP49450 140 aa9.53□□□□□ -0.88
SCAF11-205ENST00000465950 SERPINB8P50452 374 aa9.53□□□□□ -0.88
SCAF11-205ENST00000465950 CCNG1P51959 295 aa9.53□□□□□ -0.88
SCAF11-205ENST00000465950 KBTBD12Q3ZCT8 623 aa9.53□□□□□ -0.88
SCAF11-205ENST00000465950 UNQ6126/PRO20091Q6UXV3 157 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms