RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 MRASO14807 208 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 UBDO15205 165 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 ZBTB7AO95365 584 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 TGFB3P10600 412 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 MPP1Q00013 466 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 TNFAIP1Q13829 316 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 FAM187BQ17R55 369 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 SOWAHAQ2M3V2 549 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 MAP7D1Q3KQU3 841 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 SLC36A3Q495N2 470 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 ARHGAP17Q68EM7 881 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 ANKRD23Q86SG2 305 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 CENPLQ8N0S6 344 aaPredicted RBP19.95■□□□□ 0.78
SDF4-205ENST00000465727 CCNYL1Q8N7R7 359 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 HMGCLL1Q8TB92 370 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 SPPL2BQ8TCT7 592 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 ROPN1LQ96C74 230 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 C12orf42Q96LP6 360 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 HNRNPABQ99729 332 aaKnown RBP19.95■□□□□ 0.78
SDF4-205ENST00000465727 C9orf16Q9BUW7 83 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 YTHDF1Q9BYJ9 559 aaKnown RBP19.95■□□□□ 0.78
SDF4-205ENST00000465727 MRPL46Q9H2W6 279 aaKnown RBP19.95■□□□□ 0.78
SDF4-205ENST00000465727 MEAF6Q9HAF1 191 aa19.95■□□□□ 0.78
SDF4-205ENST00000465727 AQP12BA6NM10 295 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 SNAP91O60641 907 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 NOL3O60936 208 aaKnown RBP19.94■□□□□ 0.78
SDF4-205ENST00000465727 GLRBP48167 497 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 RPL34P49207 117 aaKnown RBP19.94■□□□□ 0.78
SDF4-205ENST00000465727 KCNC4Q03721 635 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 SLC10A6Q3KNW5 377 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 AGKQ53H12 422 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 NIPAL1Q6NVV3 410 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 PDZD4Q76G19 769 aaPredicted RBP19.94■□□□□ 0.78
SDF4-205ENST00000465727 ACOT1Q86TX2 421 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 AQP12AQ8IXF9 295 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 CANT1Q8WVQ1 401 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 SEPT8Q92599 483 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 SLC45A3Q96JT2 553 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 PGLYRP2Q96PD5 576 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 SETD4Q9NVD3 440 aa19.94■□□□□ 0.78
SDF4-205ENST00000465727 ZNF839A8K0R7 811 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 DLGAP1O14490 977 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 PHGDHO43175 533 aaKnown RBP19.93■□□□□ 0.78
SDF4-205ENST00000465727 NRP2O60462 931 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 USP12O75317 370 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 ZBTB11O95625 1053 aaPredicted RBP19.93■□□□□ 0.78
SDF4-205ENST00000465727 ALDH2P05091 517 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 PTPN3P26045 913 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 CHRNA5P30532 468 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 ACADSBP45954 432 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 BST2Q10589 180 aaKnown RBP19.93■□□□□ 0.78
SDF4-205ENST00000465727 GRSF1Q12849 480 aaKnown RBP eCLIP19.93■□□□□ 0.78
SDF4-205ENST00000465727 OLIG2Q13516 323 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 C16orf87Q6PH81 154 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 CBR4Q8N4T8 237 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 PNPT1Q8TCS8 783 aaKnown RBP19.93■□□□□ 0.78
SDF4-205ENST00000465727 SELENONQ9NZV5 590 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 ZNF232Q9UNY5 417 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 B3GNT3Q9Y2A9 372 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 SLC30A1Q9Y6M5 507 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 TMEM233B4DJY2 109 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 MTSS1O43312 755 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 GNAO1P09471 354 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 TFPTP0C1Z6 253 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 UGT1A6P19224 532 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 CYP2B6P20813 491 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 UGT1A1P22309 533 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 UGT1A4P22310 534 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 UGT1A3P35503 534 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 UGT1A5P35504 534 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 MATKP42679 507 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 RAB10P61026 200 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 INPP5AQ14642 412 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 RAB39AQ14964 217 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 SLC25A52Q3SY17 297 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 ABRAXAS1Q6UWZ7 409 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 PLPPR4Q7Z2D5 763 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 FAM131BQ86XD5 332 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 SIX6OS1Q8N1H7 587 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 CENPSQ8N2Z9 138 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 CHST13Q8NET6 341 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 CLEC4CQ8WTT0 213 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 MRPL57Q9BQC6 102 aaKnown RBP19.93■□□□□ 0.78
SDF4-205ENST00000465727 TDRD1Q9BXT4 1180 aaKnown RBP19.93■□□□□ 0.78
SDF4-205ENST00000465727 RHOBTB2Q9BYZ6 727 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 MINDY3Q9H8M7 445 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 EML4Q9HC35 981 aaKnown RBP19.93■□□□□ 0.78
SDF4-205ENST00000465727 SPON1Q9HCB6 807 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 AGPAT4Q9NRZ5 378 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 GTSE1Q9NYZ3 720 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 FADS3Q9Y5Q0 445 aa19.93■□□□□ 0.78
SDF4-205ENST00000465727 A0A0G2JMZ2 1700 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 LRRC37A2A6NM11 1700 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 IQCA1LA6NCM1 817 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 NCAM2O15394 837 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 F7P08709 466 aaPredicted RBP19.92■□□□□ 0.78
SDF4-205ENST00000465727 GRIA3P42263 894 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 ATP4BP51164 291 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 CCR3P51677 355 aa19.92■□□□□ 0.78
SDF4-205ENST00000465727 BCAT1P54687 386 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms