RNA–Protein interactions for RNA: ENST00000465659.5

ARHGEF3-204, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene ARHGEF3, Length 2,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-204ENST00000465659 ENO3P13929 434 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 ATP5F1P24539 256 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 PMLP29590 882 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 RPL5P46777 297 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 PGGT1BP53609 377 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 GEMP55040 296 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 PKNOX1P55347 436 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 POU4F1Q01851 419 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 CTBP1Q13363 440 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 PDCD2Q16342 344 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 USP41Q3LFD5 358 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 TWF2Q6IBS0 349 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 KIAA0930Q6ICG6 404 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 ESRP1Q6NXG1 681 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 CTU1Q7Z7A3 348 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 LZTR1Q8N653 840 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 TXNDC5Q8NBS9 432 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 ZNF419Q96HQ0 510 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 FAR2Q96K12 515 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 TRIM62Q9BVG3 475 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 ZNF696Q9H7X3 374 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 UBAP1Q9NZ09 502 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 G3BP2Q9UN86 482 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 TRIM38O00635 465 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 MATN3O15232 486 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 MAFKO60675 156 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 PAMP19021 973 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 SLC1A2P43004 574 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 POU6F1Q14863 301 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 TRIM67Q6ZTA4 783 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 KIAA0408Q6ZU52 694 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 PLEKHH3Q7Z736 793 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 SATL1Q86VE3 508 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 ATPAF2Q8N5M1 289 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 DQX1Q8TE96 717 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 TOP1MTQ969P6 601 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 DGCR14Q96DF8 476 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 FTHL17Q9BXU8 183 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 MRPL40Q9NQ50 206 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 SARDHQ9UL12 918 aa12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF3-204ENST00000465659 CCDC78A2IDD5 438 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 H0YJX3 145 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 CFLARO15519 480 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 FGF10O15520 208 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 MT-CYBP00156 380 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 YY1P25490 414 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 PCSK1P29120 753 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 HOXC8P31273 242 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 CD151P48509 253 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 TAS2R39P59534 338 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 ZNF460Q14592 562 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 PPP2R5DQ14738 602 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 PSMD5Q16401 504 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 ARTNQ5T4W7 220 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 ARHGAP36Q6ZRI8 547 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 ANKRD23Q86SG2 305 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 CCNYL1Q8N7R7 359 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 TMEM102Q8N9M5 508 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 USP33Q8TEY7 942 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 ASB9Q96DX5 294 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 CCDC126Q96EE4 140 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 ZFRQ96KR1 1074 aaKnown RBP12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 FICDQ9BVA6 458 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 PRKD2Q9BZL6 878 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 COPS7BQ9H9Q2 264 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 SUCOQ9UBS9 1254 aaKnown RBP12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 AP4B1Q9Y6B7 739 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 DFFAO00273 331 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 BRMS1LQ5PSV4 323 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 MANEALQ5VSG8 457 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 RANBP10Q6VN20 620 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 IPMKQ8NFU5 416 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 HEXDCQ8WVB3 486 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 USP13Q92995 863 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 ELMO2Q96JJ3 720 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 KLHL32Q96NJ5 620 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 PKP2Q99959 881 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 MEAF6Q9HAF1 191 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 IGSF5Q9NSI5 407 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 HACD3Q9P035 362 aa12.9□□□□□ -0.34
ARHGEF3-204ENST00000465659 TMEM233B4DJY2 109 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 STX16-NPEPL1H3BU86 382 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 TNFAIP8O95379 198 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 TFAP2AP05549 437 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 C8BP07358 591 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 CLCNKBP51801 687 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 PFKPQ01813 784 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 SULT2A1Q06520 285 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 GALNT1Q10472 559 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 FAM171BQ6P995 826 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 TLK2Q86UE8 772 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 MRPL1Q9BYD6 325 aaKnown RBP12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 MRPS26Q9BYN8 205 aaKnown RBP12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 POMKQ9H5K3 350 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 CACNG4Q9UBN1 327 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 FBXO5Q9UKT4 447 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 PCDHGA7Q9Y5G6 932 aa12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 TIMM13Q9Y5L4 95 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF3-204ENST00000465659 PATJQ8NI35 1801 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms