RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 PCDHGA5Q9Y5G8 931 aa12.55□□□□□ -0.4
CHPF2-202ENST00000465601 ATXN2Q99700 1313 aaKnown RBP12.55□□□□□ -0.4
CHPF2-202ENST00000465601 TBC1D3DA0A087WVF3 549 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 TBC1D3IA0A087WXS9 549 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 TBC1D3EA0A087X179 549 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 TBC1D3KA0A087X1G2 549 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 TBC1D3FA6NER0 549 aaPredicted RBP12.54□□□□□ -0.4
CHPF2-202ENST00000465601 LRRC72A6NJI9 287 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 MEI4A8MW99 385 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 TBC1D3LB9A6J9 549 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 MATN3O15232 486 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 DDX3YO15523 660 aaKnown RBP12.54□□□□□ -0.4
CHPF2-202ENST00000465601 GJB3O75712 270 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 PIGNO95427 931 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 TBC1D3HP0C7X1 549 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 CCNCP24863 283 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 ITGB7P26010 798 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 MPLP40238 635 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 MMP13P45452 471 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 CSNK1DP48730 415 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 SCNN1BP51168 640 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 RENBPP51606 427 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 TAS2R38P59533 333 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 COPS2P61201 443 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 MAXP61244 160 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 NSUN2Q08J23 767 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHPF2-202ENST00000465601 PDK1Q15118 436 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 ZNF805Q5CZA5 627 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 FAM182AQ5T1J6 154 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 SYCP2LQ5T4T6 812 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 PIP5KL1Q5T9C9 394 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 KIAA0895LQ68EN5 471 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 TBC1D3GQ6DHY5 549 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 TBC1D3CQ6IPX1 549 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 TIGD7Q6NT04 549 aaPredicted RBP12.54□□□□□ -0.4
CHPF2-202ENST00000465601 AADACL2Q6P093 401 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 GDPD4Q6W3E5 623 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 ZNF662Q6ZS27 426 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 B4GALNT4Q76KP1 1039 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 CCDC13Q8IYE1 715 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 TBC1D3Q8IZP1 549 aaPredicted RBP12.54□□□□□ -0.4
CHPF2-202ENST00000465601 BBS5Q8N3I7 341 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 OR2T34Q8NGX1 318 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 SNX19Q92543 992 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 FAM131CQ96AQ9 280 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 PPP1R16AQ96I34 528 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 PSKH2Q96QS6 385 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 HDAC8Q9BY41 377 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 CPEB1Q9BZB8 566 aaKnown RBP12.54□□□□□ -0.4
CHPF2-202ENST00000465601 NT5MQ9NPB1 228 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 PARD6AQ9NPB6 346 aa12.54□□□□□ -0.4
CHPF2-202ENST00000465601 ASCC3Q8N3C0 2202 aaKnown RBP12.54□□□□□ -0.4
CHPF2-202ENST00000465601 C16orf96A6NNT2 1141 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 MIF4GDA9UHW6 222 aaKnown RBP12.53□□□□□ -0.4
CHPF2-202ENST00000465601 SLC7A4O43246 635 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 PLRG1O43660 514 aaKnown RBP12.53□□□□□ -0.4
CHPF2-202ENST00000465601 PYGMP11217 842 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 CCNB1P14635 433 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 PECAM1P16284 738 aaPredicted RBP12.53□□□□□ -0.4
CHPF2-202ENST00000465601 TGM1P22735 817 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 NEK3P51956 506 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 PPIDQ08752 370 aaKnown RBP12.53□□□□□ -0.4
CHPF2-202ENST00000465601 ITKQ08881 620 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 CCDC15Q0P6D6 951 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 AP1B1Q10567 949 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 ZNF211Q13398 564 aaPredicted RBP12.53□□□□□ -0.4
CHPF2-202ENST00000465601 HNRNPDQ14103 355 aaKnown RBP12.53□□□□□ -0.4
CHPF2-202ENST00000465601 PPP2R5EQ16537 467 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 WDR45BQ5MNZ6 344 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 PLA2G2CQ5R387 149 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 FBXL19Q6PCT2 694 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 PARS2Q7L3T8 475 aaKnown RBP12.53□□□□□ -0.4
CHPF2-202ENST00000465601 CAMK1DQ8IU85 385 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 SYT12Q8IV01 421 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 TEX26Q8N6G2 289 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 UBL4BQ8N7F7 174 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 DNASE2BQ8WZ79 361 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 MAML1Q92585 1016 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 BIRC7Q96CA5 298 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 HAUS1Q96CS2 278 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 HDAC11Q96DB2 347 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 NSMCE3Q96MG7 304 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 HERPUD2Q9BSE4 406 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 OSBPL1AQ9BXW6 950 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 OSBPL8Q9BZF1 889 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 MIR1-1HGQ9H1L0 117 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 PCED1AQ9H1Q7 454 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 SUV39H2Q9H5I1 410 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 SEMA4GQ9NTN9 838 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 RBM22Q9NW64 420 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHPF2-202ENST00000465601 EIF2B4Q9UI10 523 aaKnown RBP12.53□□□□□ -0.4
CHPF2-202ENST00000465601 PILRBQ9UKJ0 227 aa12.53□□□□□ -0.4
CHPF2-202ENST00000465601 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.53□□□□□ -0.4
CHPF2-202ENST00000465601 LRRK1Q38SD2 2015 aa12.52□□□□□ -0.4
CHPF2-202ENST00000465601 PATE3B3GLJ2 98 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 KCNK1O00180 336 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 PPP1R12AO14974 1030 aaPredicted RBP12.52□□□□□ -0.41
CHPF2-202ENST00000465601 LRP3O75074 770 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 JCHAINP01591 159 aa12.52□□□□□ -0.41
CHPF2-202ENST00000465601 IGHV4-34P06331 123 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms